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CRISPRs details
NC_019956_1
Flanking alignement tool
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NC_019956_1                                                                                                                 
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Strain :
Thermoanaerobacterium thermosaccharolyticum M0795
RefSeq :
NC_019956 (plasmid pTHETHE01 ci)
CRISPR id :
NC_019956_1
DR consensus (29 bp) :
CTTCTAAACCTACATAGGATATTTCAAAC
Number of repetitions :
10
Begin Position :
96038
End Position :
96656
96038
CTTTAAACCCTACATGGAAAAATTTAAAC
TTTTAATTCGAGATAATATCTTAGTTTTTTTTATATC
96103
96104
ATTTTAATCCTAAATAGGAAAATTCAAAC
ACAAGGCTGCAAAGCACAATTCCAGATTGGATATAA
96168
96169
CTTCTAAACCCACACAAGACATTCAAACC
AAACATGTAAAAAAAGTAGAGATAAGTTATTTCGA
96232
96233
CTTCTAAACCCACATAGGATATTTCAAAC
TCGGTTGTTTATAGAAGTAATCGCCAGAATATACCCA
96298
96299
CTTCTAAACCTACATAGGATATTTCAAAC
AGTAGCAATGTGACAAGCAGTAGTGCAACTTTGACA
96363
96364
CTTCTAAACCTACATAGGATATTTCAAAC
TAGCTTACTGTTTAAGAGCAGTTGTGAGATACTTAGA
96429
96430
CTTCTAAACCTACATAGGATATTTCAAAC
TCTTGGTATGTCGCTTAACACATTTGCAGCCAATTT
96494
96495
CTTCTAAACCTACATAGGATATTTCAAAC
TACCATCTTTTATATAAGGCATAGCTCCTAACTGCTC
96560
96561
CTTCTAAACCTACATAGGATATTTCAAAC
AATGAGCCAGAGGCTGAAATGTTGGTCGAAAAAATTTC
96627
96628
CTTCTAAACCTACATAGGATATTTCAAAC
96656
Left flanking sequence : Till position 96038 (length
bp)
AATCTTTTATTGAACTCATAAAGATTGTCCTGTATGTAATCTTCTAAACCCACAAGGGAATATATCCAAA
GTACCTTTCCATCCGCTTTCCCTTTATCAT
Right flanking sequence : From position 96656 (length
bp)
CCTAAAAGCAAAAGCGATAATATCAATGCTTTTAAAGTATAAAGTAATCAAAATATCAAGTCGATGTCTC
CCGATGCAAAAACATCGGGACTTCGACAAG
Print the CRISPR sequence : From position
bp To position
bp