CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_020055_4
Flanking alignement tool
Page manual
  
Home Page
NC_020055_4                                                                                                                 
top
Strain :
Desulfovibrio hydrothermalis AM13 = DSM 14728
RefSeq :
NC_020055 (chromosome linear)
CRISPR id :
NC_020055_4
DR consensus (36 bp) :
GTCAAAACCCATACCGATATGGATACCTCTTTTGAG
Number of repetitions :
9
Begin Position :
118127
End Position :
118736
118127
TTTATTGACCATACCGATACGGATACCTCTTTTGAG
TCTGCAACCTTTTAGCGGCAAGAAAAAGTGAGATGG
118198
118199
GTCAAAACCCATACCGATATGGATACCTCTTTTGAG
TCTTATGAAGGGCTGAGTGCACTTTTCGATTATTA
118269
118270
GTCAAAACCCATACCGATATGGATACCTCTTTTGAG
CAGTAACGCGTTTGGCGATATGAGGCTAAATGCG
118339
118340
GTCAAAACCCATACCGATATGGATACCTCTTTTGAG
AATGAGCGAAATGTATGCCAGAGGTTATCTGGTATT
118411
118412
GTCAAAACCCATACCGATATGGATACCTCTTTTGAG
TTCCAAGGGAGGGGAGGGAGCCATTCGCTTTGACAGA
118484
118485
GTCAAAACCCATACCGATATGGATACCTCTTTTGAG
CTCTTACATAGACAGAGGAGTGAAAAACTCAATTAT
118556
118557
GTCAAAACCCATACCGATATGGATACCTCTTTTGAG
GTCATGACATTCCGGCGTATATGAGTAACATCAAG
118627
118628
GTCAAAACCCATACCGATATGGATACCTCTTTTGAG
TTTATATTTATTTTGGCAATAATCTGCTTCTCTAGCC
118700
118701
GTCAAAACCCATACCGATATGGATACCTCTTTTGAG
118736
Left flanking sequence : Till position 118127 (length
bp)
GCTGATGTAAAGCCTGAGAGGAAAATCATAGAGGTGTGCACGTTGATTTATATTAAAATTAGTGACGCAC
AGCTTCGACTTTGTCACAGGTAAATTAAAT
Right flanking sequence : From position 118736 (length
bp)
GCTATGGTTTTTATCTACCCTATTTCCAACTACTTGCAAAGCTGTTTTCAGCTATGTCCGAAAAAAAATC
ACTTTTCCACACCCGTTTTTGGTACATAGC
Print the CRISPR sequence : From position
bp To position
bp