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CRISPRs details
NC_020134_6
Flanking alignement tool
Page manual
  
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NC_020134_6                                                                                                                 
top
Strain :
Clostridium stercorarium subsp. stercorarium DSM 8532
RefSeq :
NC_020134 (chromosome circular)
CRISPR id :
NC_020134_6
DR consensus (30 bp) :
ATTTACATTCCAATATGGTTAGATTCAAAG
Number of repetitions :
64
Begin Position :
1784944
End Position :
1789135
1784944
TTTTACTACCACTCATGGGAAGATTCAAAG
TTAATTAGAATTTTTAAGCTTAATCCCACCAAAGA
1785008
1785009
ATTTACACTCCAATATGGTTAGATTCAAAG
ATGTAACCCGGCTGCCTTAATAGCTTCTTCAGCTT
1785073
1785074
ATTTACATTCCAATATGGTTAGATTCAAAG
TAAGGCCCGAGACCCACTCCCAAGGCCCATTAAG
1785137
1785138
ATTTACATTCCAATATGGTTAGATTCAAAG
CCGGCGATGAAGAGGAAAAAATAAAGAATGATAAT
1785202
1785203
ATTTACATTCCAATATGGTTAGATTCAAAG
CTCGTAGGGAGCTTTTCAGATAAAGGCGGTACAGG
1785267
1785268
ATTTACATTCCAATATGGTTAGATTCAAAG
GAAATACCGCGCGATACTCTTCCCTAAAATGCAATT
1785333
1785334
ATTTACATTCCAATATGGTTAGATTCAAAG
CCTATTCCCATGAAGCTGTTTTTTCACTTCTTCCG
1785398
1785399
ATTTACATTCCAATATGGTTAGATTCAAAG
AGTTTCCCCCCCCTACCCCTTTCAAAATACTAAAAA
1785464
1785465
ATTTACATTCCAATATGGTTAGATTCAAAG
TTACTCTATTATTCCTTACATAATTAATATTATGTAGTGAATGTATGCTATACC
1785548
1785549
ATTTACATTCCAATATGGTTAGATTCAAAG
CTGAATTGCCGCATCTGCAATATGAGCTGACTTAA
1785613
1785614
ATTTACATTCCAATATGGTTAGATTCAAAG
TTTTTTAAGTCTGAAATTAAACTCCTGGGAGATGTA
1785679
1785680
ATTTACATTCCAATATGGTTAGATTCAAAG
GTGGAACGGTTCTGGCCGATTTTTACAAAGATACTAA
1785746
1785747
ATTTACATTCCAATATGGTTAGATTCAAAG
TATAGTATTCATCTCCATGCTCATACTTTAAATCA
1785811
1785812
ATTTACATTCCAATATGGTTAGATTCAAAG
CCAACCTGTTTGGATGTTATAAAATCTATCACCTAC
1785877
1785878
ATTTACATTCCAATATGGTTAGATTCAAAG
TCGTCAACCCATATCTCCATCCTCGTGCTGTCCAG
1785942
1785943
ATTTACATTCCAATATGGTTAGATTCAAAG
AGGAATTGAGGTTGAAGAAAAGAAAAAAAGAAGGA
1786007
1786008
ATTTACATTCCAATATGGTTAGATTCAAAG
TATGCCTTTATACCGTGATCCGGGAAGACAATGAGT
1786073
1786074
ATTTACATTCCAATATGGTTAGATTCAAAG
AACGCAGGCCCCTTTGATTCATTCTGACCAGTTGAGCTC
1786142
1786143
ATTTACATTCCAATATGGTTAGATTCAAAG
GCTTTTCCAGCCTTGCTGACACCCTCTATTATAT
1786206
1786207
ATTTACATTCCAATATGGTTAGATTCAAAG
TTGTAGGGTGCATCTCAGATAAAGGCGGTACAGG
1786270
1786271
ATTTACATTCCAATATGGTTAGATTCAAAG
GAAGAACGCAAAATGGTGTTTCGTTACGTACCCTAA
1786336
1786337
ATTTACATTCCAATATGGTTAGATTCAAAG
TATTGCTATTCTATCCCCTAAATTAGCCACAAGAAT
1786402
1786403
ATTTACATTCCAATATGGTTAGATTCAAAG
GGTATCTTCCCAAACACAGCGTCAATTACCTCGGTA
1786468
1786469
ATTTACATTCCAATATGGTTAGATTCAAAG
GACTGATGCAGGTAATATCCCTATGGATTTACCAT
1786533
1786534
ATTTACATTCCAATATGGTTAGATTCAAAG
ATTATAAGGGTATATGGGAAAGATGGGTCAAAGATA
1786599
1786600
ATTTACATTCCAATATGGTTAGATTCAAAG
TGATCAGGTCTTTTTCTACCCTGAACAAAAATCTTG
1786665
1786666
ATTTACATTCCAATATGGTTAGATTCAAAG
TATAAGTAAAGAAAACACATAATCATAATTAAAAC
1786730
1786731
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTCCAGCCGAAATGGGCCTTAACATAGACGGTTA
1786795
1786796
ATTTACATTCCAATATGGTTAGATTCAAAG
TCTTTTATGCCCTGCTTTTTATTTTTGCTGGAGTACA
1786862
1786863
ATTTACATTCCAATATGGTTAGATTCAAAG
GGTAAGAACCTACAATGAATACGACGAGGCCAGCGAA
1786929
1786930
ATTTACATTCCAATATGGTTAGATTCAAAG
GCTGTTTTTGAGGAACGGGTTCTGAATCCTATTCCTGA
1786997
1786998
ATTTACATTCCAATATGGTTAGATTCAAAG
TGAATCAAACGCCTTTGCATGGGGCGTTGCAGCTGT
1787063
1787064
ATTTACATTCCAATATGGTTAGATTCAAAG
GACTGGTGCTTTGTTACGTACCCTACACCCCTTCA
1787128
1787129
ATTTACATTCCAATATGGTTAGATTCAAAG
GCTACTTCGAGGCGCAGGCGGAGGCCGAGCGCCAGG
1787194
1787195
ATTTACATTCCAATATGGTTAGATTCAAAG
GTAGAAGGTGGCTTTGTTCATCAGCCATTTGGCG
1787258
1787259
ATTTACATTCCAATATGGTTAGATTCAAAG
TGTGCTTGAGGCTTGCATCGAAAAGTACCAAAACA
1787323
1787324
ATTTACATTCCAATATGGTTAGATTCAAAG
CTTGTCGGGTTCATATCGGCGTCAGCACTTTATATC
1787389
1787390
ATTTACATTCCAATATGGTTAGATTCAAAG
GGATGACAGCGGTTTTCAATTTACCCGCATAAAAACAAG
1787458
1787459
ATTTACATTCCAATATGGTTAGATTCAAAG
CCACTTGCCGTTTCCTCGCCATCGAAAAGAATCGA
1787523
1787524
ATTTACATTCCAATATGGTTAGATTCAAAG
GCAGCTCTTTCTAACATAAAATGAGTTGCATTGTA
1787588
1787589
ATTTACATTCCAATATGGTTAGATTCAAAG
GATTTGGTTGCATTCGTAACCATTTCATCAAAAAAA
1787654
1787655
ATTTACATTCCAATATGGTTAGATTCAAAG
CAAGCGTTCGTATCATGACGAAATATGTTTCTATCAT
1787721
1787722
ATTTACATTCCAATATGGTTAGATTCAAAG
GGAGCAGGAGGCTCAAGACATCGACTGGCTGAGTGA
1787787
1787788
ATTTACATTCCAATATGGTTAGATTCAAAG
CATTATGAACGATGCTGACTGGAATACTCACATTGT
1787853
1787854
ATTTACATTCCAATATGGTTAGATTCAAAG
CCTGCGCTTGTTCGCCCGGTTTACTATCTGCAAAA
1787918
1787919
ATTTACATTCCAATATGGTTAGATTCAAAG
TACTTTTTCTGCCTTTACCCATCTTACATAATCTAC
1787984
1787985
ATTTACATTCCAATATGGTTAGATTCAAAG
GCAACCCTGCACTGCAGCTTGTGATAGCTAAAGCTGA
1788051
1788052
ATTTACATTCCAATATGGTTAGATTCAAAG
GCTTCAACTTTTTCTTGTTTTTTCTTTGCAACTTTT
1788117
1788118
ATTTACATTCCAATATGGTTAGATTCAAAG
ATGGAAAGCCTTAGCCGTACCGCGTAAGGAGTTTA
1788182
1788183
ATTTACATTCCAATATGGTTAGATTCAAAG
CACCCAAACACACATCCGAGGTCAAATTTTTGAAA
1788247
1788248
ATTTACATTCCAATATGGTTAGATTCAAAG
GTGAGCTGATATGCATTACAACCTTGCCGGTTTTAT
1788313
1788314
ATTTACATTCCAATATGGTTAGATTCAAAG
GAAGGAGGAAGGCATGACATGACCAAACAGGAAGCAT
1788380
1788381
ATTTACATTCCAATATGGTTAGATTCAAAG
GCCGAGTTTCGCCACGAGTGCCTCATATTCGGCAT
1788445
1788446
ATTTACATTCCAATATGGTTAGATTCAAAG
AATAGCTCCAAACATAGATGTAATGTTTCATGATAG
1788511
1788512
ATTTACATTCCAATATGGTTAGATTCAAAG
CAGTGCTGAGCGCTATACATACGACAAACGAGGGCC
1788577
1788578
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTATCACCTTTTGAGGAACCGGTGGACTATGTAAAA
1788644
1788645
ATTTACATTCCAATATGGTTAGATTCAAAG
TGTTTCCGGTGTCATGTATGCGCCGTGTTTTCTGA
1788709
1788710
ATTTACATTCCAATATGGTTAGATTCAAAG
GCACCCGGTGGAACATTCCCGACTGGAAACATTTAC
1788775
1788776
ATTTACATTCCAATATGGTTAGATTCAAAG
TCATGGCTGGATGAAGAGGCACAGAAGGTCTGGAAGA
1788842
1788843
ATTTACATTCCAATATGGTTAGATTCAAAG
TCTAACCCTTATCGGTATTATATGGTCTACTTCTG
1788907
1788908
ATTTACATTCCAATATGGTTAGATTCAAAG
GTTGTATTACGTTTTCCAAAAACTCTTTTAGAGAAAG
1788974
1788975
ATTTACATTCCAATATGGTTAGATTCAAAG
TGGTCAAAATACTTTTGTCCTGTCACTTTCGCAAT
1789039
1789040
ATTTACATTCCAATATGGTTAGATTCAAAG
ATTTTCGCGTGAATGCGTTTCCCAATAATTTTCTGA
1789105
1789106
ATTTACATTCCAATATGGTTAGATTCAAAG
1789135
Left flanking sequence : Till position 1784944 (length
bp)
GATGGAAGATGCAGGATTTATCAGGTCAATGTCCAAAAAAGGGTGTACTGCAGATAATTCCGCTTGTGAA
GGGTTCTTTGGGAGGCTTAAAAACGAAATG
Right flanking sequence : From position 1789135 (length
bp)
GCGATTAATTATAATACTTGAATTTCATATCTTTTAAGTACAGTTTCTGTCTATGATATAAGGTTAAAAA
AATATGTATTACATACAGCTATATAAATTT
Print the CRISPR sequence : From position
bp To position
bp