Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_020411_4                                                                                                                 top


Strain : Hydrogenobaculum sp. HO RefSeq :NC_020411 (chromosome circular)
CRISPR id : NC_020411_4
DR consensus (30 bp) : GAGTTTCATCTGAACCGTGTGGGTTAAGAANumber of repetitions :3
Begin Position : 346991 End Position : 347152

346991GGGTTTCATCTGAACCGTGTGGGTTAAGAAGCACAACACCTTTGCCGTTTACAAGCACGTTTGAA 347055
347056GAGTTTCATCTGAACCGTGTGGGTTAAGAAGCTGATTTGACAGCATCAAATACAGTTGCAATAATCT 347122
347123GAGTTTCATCTGAACCGTGTGGGTTAAGAA347152
Left flanking sequence : Till position 346991 (length bp)
CAGAATCTGGCATTTTCGGAAAATTACCTTCATTTGCGGGGGGGTACCCCCTTGACAAAACCATTGATAC
ACTATATAATATTAGGAGTAGTGATTTCTG
Right flanking sequence : From position 347152 (length bp)
AAAGAAAACGTATTGTATAAGTTCAGATAGACTGAACATAGAGTGCCTGAGCATGTTTCAGATGCCTGTC
TTCTTAAAAGACACTAATCTCATGATGTAA
Print the CRISPR sequence : From position bp To position bp