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CRISPRs details
NC_020887_10
Flanking alignement tool
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NC_020887_10                                                                                                                 
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Strain :
Clostridium stercorarium subsp. stercorarium DSM 8532
RefSeq :
NC_020887 (chromosome circular)
CRISPR id :
NC_020887_10
DR consensus (30 bp) :
GTTTCAATTCCTTATAGGTAAACTTCAAAC
Number of repetitions :
15
Begin Position :
2317560
End Position :
2318511
2317560
CTTCTTCACGTTTCAATTCCTTATAGGTAA
CAACCATCATTTGTGCAGCTTTCATTCATTTACTC
2317624
2317625
CATTTACTCGTTTCAATTCCTTATAGGTAA
GATACGATTATGAAGTGCGTTTAGAATGCAACAACTG
2317691
2317692
CAACAACTGGTTTCAATTCCTTATAGGTAA
AGAGTGGACGGCGGTCATTATCATGACCGCTTAGAA
2317757
2317758
CGCTTAGAAGTTTCAATTCCTTATAGGTAA
GCATTTTATGCTCGTAGGGTACATCTCAGATAAAGG
2317823
2317824
AGATAAAGGGTTTCAATTCCTTATAGGTAA
GACTGATGCAGGTAATATTCCTATGGATTTACCAC
2317888
2317889
ATTTACCACGTTTCAATTCCTTATAGGTAA
GATGCCGTATGAGGCATACCTAAACGCCCGAGAATC
2317954
2317955
CCGAGAATCGTTTCAATTCCTTATAGGTAA
GGTATCCAGCGCCACAATCACCTTTGCCTTGTCAAA
2318020
2318021
CTTGTCAAAGTTTCAATTCCTTATAGGTAA
ACAAAGTCTATTTCTTCGGGAGTTTGAAATCTCCAA
2318086
2318087
AATCTCCAAGTTTCAATTCCTTATAGGTAA
TAAGTATGGTGACGGTGCAATGAACCTTTGGAGTT
2318151
2318152
TTTGGAGTTGTTTCAATTCCTTATAGGTAA
GCAGTAGCACTCATATAATCACCTCACAAATAAAA
2318216
2318217
CAAATAAAAGTTTCAATTCCTTATAGGTAA
TGAATGTATGCTATACCGGGTACGTTTACAAATTTT
2318282
2318283
ACAAATTTTGTTTCAATTCCTTATAGGTAA
CATTAAGCAATATATTGTATAGTATAGCATAAAAAT
2318348
2318349
CATAAAAATGTTTCAATTCCTTATAGGTAA
AAAAAGTCGCATCACTTGAAGAAGGCGCAATAAAATA
2318415
2318416
AATAAAATAGTTTCAATTCCTTATAGGTAA
CTTCGTTTTCAAGCTTGTCCATCTGTGATATAATTT
2318481
2318482
ATATAATTTGTTTCAATTCCTTATAGGTAA
2318511
Left flanking sequence : Till position 2317560 (length
bp)
CAGAATGCATAAATGTTATAATTATACAAAAATAAAGAAAGGAGAACCTAACTTAGAAAAGCTAAAAAAT
TGTCTTGACAAGTGGGGGCATTATAGAATT
Right flanking sequence : From position 2318511 (length
bp)
ACTTCAAACCCGTAAAACCCGCATAAAAAGCCACTTTTATAAAATCACAATTTTTAAATTTTCAAGCATT
AAAATCCGCAAATAGCTGATATTGCTCAAT
Print the CRISPR sequence : From position
bp To position
bp