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CRISPRs details
NC_020887_6
Flanking alignement tool
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NC_020887_6                                                                                                                 
top
Strain :
Clostridium stercorarium subsp. stercorarium DSM 8532
RefSeq :
NC_020887 (chromosome circular)
CRISPR id :
NC_020887_6
DR consensus (30 bp) :
ATTTACATTCCAATATGGTTAGATTCAAAG
Number of repetitions :
64
Begin Position :
1784467
End Position :
1788658
1784467
CGAAATGTTTTACTACCACTCATGGGAAGA
TTAATTAGAATTTTTAAGCTTAATCCCACCAAAGA
1784531
1784532
CCAAAGAATTTACACTCCAATATGGTTAGA
ATGTAACCCGGCTGCCTTAATAGCTTCTTCAGCTT
1784596
1784597
TCAGCTTATTTACATTCCAATATGGTTAGA
TAAGGCCCGAGACCCACTCCCAAGGCCCATTAAG
1784660
1784661
CATTAAGATTTACATTCCAATATGGTTAGA
CCGGCGATGAAGAGGAAAAAATAAAGAATGATAAT
1784725
1784726
TGATAATATTTACATTCCAATATGGTTAGA
CTCGTAGGGAGCTTTTCAGATAAAGGCGGTACAGG
1784790
1784791
GTACAGGATTTACATTCCAATATGGTTAGA
GAAATACCGCGCGATACTCTTCCCTAAAATGCAATT
1784856
1784857
TGCAATTATTTACATTCCAATATGGTTAGA
CCTATTCCCATGAAGCTGTTTTTTCACTTCTTCCG
1784921
1784922
TCTTCCGATTTACATTCCAATATGGTTAGA
AGTTTCCCCCCCCTACCCCTTTCAAAATACTAAAAA
1784987
1784988
CTAAAAAATTTACATTCCAATATGGTTAGA
TTACTCTATTATTCCTTACATAATTAATATTATGTAGTGAATGTATGCTATACC
1785071
1785072
CTATACCATTTACATTCCAATATGGTTAGA
CTGAATTGCCGCATCTGCAATATGAGCTGACTTAA
1785136
1785137
GACTTAAATTTACATTCCAATATGGTTAGA
TTTTTTAAGTCTGAAATTAAACTCCTGGGAGATGTA
1785202
1785203
AGATGTAATTTACATTCCAATATGGTTAGA
GTGGAACGGTTCTGGCCGATTTTTACAAAGATACTAA
1785269
1785270
ATACTAAATTTACATTCCAATATGGTTAGA
TATAGTATTCATCTCCATGCTCATACTTTAAATCA
1785334
1785335
TAAATCAATTTACATTCCAATATGGTTAGA
CCAACCTGTTTGGATGTTATAAAATCTATCACCTAC
1785400
1785401
CACCTACATTTACATTCCAATATGGTTAGA
TCGTCAACCCATATCTCCATCCTCGTGCTGTCCAG
1785465
1785466
TGTCCAGATTTACATTCCAATATGGTTAGA
AGGAATTGAGGTTGAAGAAAAGAAAAAAAGAAGGA
1785530
1785531
AGAAGGAATTTACATTCCAATATGGTTAGA
TATGCCTTTATACCGTGATCCGGGAAGACAATGAGT
1785596
1785597
AATGAGTATTTACATTCCAATATGGTTAGA
AACGCAGGCCCCTTTGATTCATTCTGACCAGTTGAGCTC
1785665
1785666
TGAGCTCATTTACATTCCAATATGGTTAGA
GCTTTTCCAGCCTTGCTGACACCCTCTATTATAT
1785729
1785730
ATTATATATTTACATTCCAATATGGTTAGA
TTGTAGGGTGCATCTCAGATAAAGGCGGTACAGG
1785793
1785794
GTACAGGATTTACATTCCAATATGGTTAGA
GAAGAACGCAAAATGGTGTTTCGTTACGTACCCTAA
1785859
1785860
ACCCTAAATTTACATTCCAATATGGTTAGA
TATTGCTATTCTATCCCCTAAATTAGCCACAAGAAT
1785925
1785926
CAAGAATATTTACATTCCAATATGGTTAGA
GGTATCTTCCCAAACACAGCGTCAATTACCTCGGTA
1785991
1785992
CTCGGTAATTTACATTCCAATATGGTTAGA
GACTGATGCAGGTAATATCCCTATGGATTTACCAT
1786056
1786057
TTACCATATTTACATTCCAATATGGTTAGA
ATTATAAGGGTATATGGGAAAGATGGGTCAAAGATA
1786122
1786123
AAAGATAATTTACATTCCAATATGGTTAGA
TGATCAGGTCTTTTTCTACCCTGAACAAAAATCTTG
1786188
1786189
AATCTTGATTTACATTCCAATATGGTTAGA
TATAAGTAAAGAAAACACATAATCATAATTAAAAC
1786253
1786254
TTAAAACATTTACATTCCAATATGGTTAGA
GTTCCAGCCGAAATGGGCCTTAACATAGACGGTTA
1786318
1786319
ACGGTTAATTTACATTCCAATATGGTTAGA
TCTTTTATGCCCTGCTTTTTATTTTTGCTGGAGTACA
1786385
1786386
GAGTACAATTTACATTCCAATATGGTTAGA
GGTAAGAACCTACAATGAATACGACGAGGCCAGCGAA
1786452
1786453
CAGCGAAATTTACATTCCAATATGGTTAGA
GCTGTTTTTGAGGAACGGGTTCTGAATCCTATTCCTGA
1786520
1786521
TTCCTGAATTTACATTCCAATATGGTTAGA
TGAATCAAACGCCTTTGCATGGGGCGTTGCAGCTGT
1786586
1786587
CAGCTGTATTTACATTCCAATATGGTTAGA
GACTGGTGCTTTGTTACGTACCCTACACCCCTTCA
1786651
1786652
CCCTTCAATTTACATTCCAATATGGTTAGA
GCTACTTCGAGGCGCAGGCGGAGGCCGAGCGCCAGG
1786717
1786718
CGCCAGGATTTACATTCCAATATGGTTAGA
GTAGAAGGTGGCTTTGTTCATCAGCCATTTGGCG
1786781
1786782
TTTGGCGATTTACATTCCAATATGGTTAGA
TGTGCTTGAGGCTTGCATCGAAAAGTACCAAAACA
1786846
1786847
CAAAACAATTTACATTCCAATATGGTTAGA
CTTGTCGGGTTCATATCGGCGTCAGCACTTTATATC
1786912
1786913
TTATATCATTTACATTCCAATATGGTTAGA
GGATGACAGCGGTTTTCAATTTACCCGCATAAAAACAAG
1786981
1786982
AAACAAGATTTACATTCCAATATGGTTAGA
CCACTTGCCGTTTCCTCGCCATCGAAAAGAATCGA
1787046
1787047
GAATCGAATTTACATTCCAATATGGTTAGA
GCAGCTCTTTCTAACATAAAATGAGTTGCATTGTA
1787111
1787112
CATTGTAATTTACATTCCAATATGGTTAGA
GATTTGGTTGCATTCGTAACCATTTCATCAAAAAAA
1787177
1787178
AAAAAAAATTTACATTCCAATATGGTTAGA
CAAGCGTTCGTATCATGACGAAATATGTTTCTATCAT
1787244
1787245
CTATCATATTTACATTCCAATATGGTTAGA
GGAGCAGGAGGCTCAAGACATCGACTGGCTGAGTGA
1787310
1787311
TGAGTGAATTTACATTCCAATATGGTTAGA
CATTATGAACGATGCTGACTGGAATACTCACATTGT
1787376
1787377
ACATTGTATTTACATTCCAATATGGTTAGA
CCTGCGCTTGTTCGCCCGGTTTACTATCTGCAAAA
1787441
1787442
TGCAAAAATTTACATTCCAATATGGTTAGA
TACTTTTTCTGCCTTTACCCATCTTACATAATCTAC
1787507
1787508
AATCTACATTTACATTCCAATATGGTTAGA
GCAACCCTGCACTGCAGCTTGTGATAGCTAAAGCTGA
1787574
1787575
AAGCTGAATTTACATTCCAATATGGTTAGA
GCTTCAACTTTTTCTTGTTTTTTCTTTGCAACTTTT
1787640
1787641
AACTTTTATTTACATTCCAATATGGTTAGA
ATGGAAAGCCTTAGCCGTACCGCGTAAGGAGTTTA
1787705
1787706
GAGTTTAATTTACATTCCAATATGGTTAGA
CACCCAAACACACATCCGAGGTCAAATTTTTGAAA
1787770
1787771
TTTGAAAATTTACATTCCAATATGGTTAGA
GTGAGCTGATATGCATTACAACCTTGCCGGTTTTAT
1787836
1787837
GTTTTATATTTACATTCCAATATGGTTAGA
GAAGGAGGAAGGCATGACATGACCAAACAGGAAGCAT
1787903
1787904
GAAGCATATTTACATTCCAATATGGTTAGA
GCCGAGTTTCGCCACGAGTGCCTCATATTCGGCAT
1787968
1787969
TCGGCATATTTACATTCCAATATGGTTAGA
AATAGCTCCAAACATAGATGTAATGTTTCATGATAG
1788034
1788035
ATGATAGATTTACATTCCAATATGGTTAGA
CAGTGCTGAGCGCTATACATACGACAAACGAGGGCC
1788100
1788101
GAGGGCCATTTACATTCCAATATGGTTAGA
GTTATCACCTTTTGAGGAACCGGTGGACTATGTAAAA
1788167
1788168
TGTAAAAATTTACATTCCAATATGGTTAGA
TGTTTCCGGTGTCATGTATGCGCCGTGTTTTCTGA
1788232
1788233
TTTCTGAATTTACATTCCAATATGGTTAGA
GCACCCGGTGGAACATTCCCGACTGGAAACATTTAC
1788298
1788299
CATTTACATTTACATTCCAATATGGTTAGA
TCATGGCTGGATGAAGAGGCACAGAAGGTCTGGAAGA
1788365
1788366
TGGAAGAATTTACATTCCAATATGGTTAGA
TCTAACCCTTATCGGTATTATATGGTCTACTTCTG
1788430
1788431
ACTTCTGATTTACATTCCAATATGGTTAGA
GTTGTATTACGTTTTCCAAAAACTCTTTTAGAGAAAG
1788497
1788498
GAGAAAGATTTACATTCCAATATGGTTAGA
TGGTCAAAATACTTTTGTCCTGTCACTTTCGCAAT
1788562
1788563
TCGCAATATTTACATTCCAATATGGTTAGA
ATTTTCGCGTGAATGCGTTTCCCAATAATTTTCTGA
1788628
1788629
TTTCTGAATTTACATTCCAATATGGTTAGA
1788658
Left flanking sequence : Till position 1784467 (length
bp)
TTTCCAGGATGGAAGATGCAGGATTTATCAGGTCAATGTCCAAAAAAGGGTGTACTGCAGATAATTCCGC
TTGTGAAGGGTTCTTTGGGAGGCTTAAAAA
Right flanking sequence : From position 1788658 (length
bp)
TTCAAAGGCGATTAATTATAATACTTGAATTTCATATCTTTTAAGTACAGTTTCTGTCTATGATATAAGG
TTAAAAAAATATGTATTACATACAGCTATA
Print the CRISPR sequence : From position
bp To position
bp