Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_020887_7                                                                                                                 top


Strain : Clostridium stercorarium subsp. stercorarium DSM 8532 RefSeq :NC_020887 (chromosome circular)
CRISPR id : NC_020887_7
DR consensus (30 bp) : GTTAATAATTAACCATTATGGAATGTAAATNumber of repetitions :5
Begin Position : 2070272 End Position : 2070599

2070272GGGACGGGGTTAATAATTAACCATTATGGAGCTGTTCAGCAATCCCTTCGCATCATACGGTGTTGC 2070337
2070338GGTGTTGCGTTAATAATTAACCATTATGGAAGTGTGAGTTACGAGCTTACAATATACGATGAAGAA 2070403
2070404ATGAAGAAGTTAATAATTAACCATTATGGATTGTTTATAGCCTTTTCAAATGTGCAATGCAATATA 2070469
2070470GCAATATAGTCAATAATCAACCATTATGGAGAATCAAGCAAATTTCGTTCTATTCTGGATGCAAATTTATATTTCGATATAAAATACGATGGAGCCACTT 2070569
2070570AGCCACTTGTTAATAATTTACCATTACGAA2070599
Left flanking sequence : Till position 2070272 (length bp)
TTTGAAAAAATAAATAAAAAACATATTAAGTTTTTTACAGCTTAAATTTACCGTTAGACAGAAACAAAAA
GCACAATATTTGGTGCTGAATATATCTATC
Right flanking sequence : From position 2070599 (length bp)
TGAAAACAGTTATTGCGATGTCAGGAGAATAAACTATGGAGTATTATGCTAAATTGAACCCGACTCAAAC
CATTCTTGAGCATACACAAAAAGCATTGGA
Print the CRISPR sequence : From position bp To position bp