Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_022544_3                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Typhimurium str. DT2 RefSeq :NC_022544 (chromosome circular)
CRISPR id : NC_022544_3
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :13
Begin Position : 3036199 End Position : 3036960

3036199CGGTTTATCCCCGCTGGCGCGGGGAACACTGGACCGATGGGGCCAACATCGCCGAACGTGG 3036259
3036260CGGTTTATCCCCGCTGGCGCGGGGAACACGTTACGTTCGGTAAATGGAAAGCGGCGAATAT 3036320
3036321CGGTTTATCCCCGCTGGCGCGGGGAACACCCAGAAAGTGCCGGTAGTGCCTGATGAACGAC 3036381
3036382CGGTTTATCCCCGCTGGCGCGGGGAACACCGCGCCCACTTCCGTAAAATACAGATAATCCA 3036442
3036443CGGTTTATCCCCGCTGGCGCGGGGAACACGGCAGCGGGCGAGGCAAACACATTCGGGGCGT 3036503
3036504CGGTTTATCCCCGCTGGCGCGGGGAACACGGTAATTTCTCATCTAACAGCCTGTACGCCTC 3036564
3036565AGGTTTATCCCCGCTGGCGCGGGGAACACGAATCTAATGCAACAGATGAATAAACACGTAA 3036625
3036626CGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCGTCAATGCGAAATTTTCCGCGACG 3036686
3036687CGGTTTATCCCCGCTGGCGCGGGGAACACTCCCATTCACCAACAACAATATCGCCCTGCAA 3036747
3036748CGGTTTATCCCCGCTGGCGCGGGGAACACACTTCCTTCAGTCTTAACGATAATCCGCAACG 3036808
3036809CGGTTTATCCCCGCTGGCGCGGGGAACACGCAAAATAGCGATGAGCTGGCTACGCCCACTGG 3036870
3036871CGGTTTATCCCCGCTGGCGCGGGGAACACCAGCACGAAAAATTATTTACTGTCGTTGCTCA 3036931
3036932CGGTTTATCCCCGCTGGCGCGGGGAACAC3036960
Left flanking sequence : Till position 3036199 (length bp)
TTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAA
TTAAAGCCGAGGGTGGCACCGCGCCTTATT
Right flanking sequence : From position 3036960 (length bp)
ACTAAAACTATATATTTGTTCTAAAAGCCCTTTTTTACTACATAACAAACTACCAACGGTAAGATAACAA
TTCCTTATTATTAAAGAACATTCAACTTAT
Print the CRISPR sequence : From position bp To position bp