Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_022579_5                                                                                                                 top


Strain : Desulfovibrio hydrothermalis RefSeq :NC_022579 (chromosome linear)
CRISPR id : NC_022579_5
DR consensus (36 bp) : CTCAAAAGAGGTATCCATATCGGTATGGGTTTTGACNumber of repetitions :3
Begin Position : 2366564 End Position : 2366737

2366564CTCAAAAGAGGTATCCATATCGGTATGGGTTTTGACTGAAACTTCCTTCCGAACGCAGGAGCAGGAGCAA 2366633
2366634CTCAAAAGAGGTATCCATATCGGTATGGGTTTTGACTTGCAGCCGAAAGAGATCTGTACAGTCTTTTT 2366701
2366702CTCAAAAGAGGTATCCATATCGGTATGGGTTTTGAC2366737
Left flanking sequence : Till position 2366564 (length bp)
GCTATGTATCAAAAAAGCCTGTGGAAAAGTGATGATTTTTCGGACATAGCTGAAAACAGCTTTGCAAGTA
CTTGGAAATAGGGTAGATAAAACCCATAGC
Right flanking sequence : From position 2366737 (length bp)
GCAATAAAGCCGCAACTCTTTATTTGAGATTGCGGCTTTATTGCGTTGGAAATTTATTACAAACTTAAAA
TTACTAAATACTTGCTATTTTTATTCGCAA
Print the CRISPR sequence : From position bp To position bp