Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_023035_1                                                                                                                 top


Strain : Spirochaeta sp. L21-RPul-D2 RefSeq :NC_023035 (chromosome circular)
CRISPR id : NC_023035_1
DR consensus (32 bp) : GTTTCAATCCGCGCTCCCGCACGGGGAGCGATNumber of repetitions :35
Begin Position : 612803 End Position : 615089

612803GTTTCAATCCGCGCTCCCGCACGGGGAGCGATGGTGGGGCGTGATTTTGGAATCAACACTGACATG 612868
612869GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTTTCGATGTTAGTGACGCGGTTGCGGAATCAATG 612934
612935GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTCCTGCTCAGAAAGAGTGTTAAGGAATGATTCAA 613000
613001GTTTCAATCCGCGCTCCCGCACGGGGAGCGATAAGTGCTGCCGTCAGCTTTGCAATCTGATCATC 613065
613066GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTTTTATCAGCATCGCAATAATGAGGCTCTTACCC 613131
613132GTTTCAATCCGCGCTCCCGCACGGGGAGCGATATTGTGCAGATCAAAAAAATCAGGATTGACGGAG 613197
613198GTTTCAATCCGCGCTCCCGCACGGGGAGCGATATCAGCTTCGAAGATGTAACCCCGGCGAGTGCTTG 613264
613265GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTTTAACTGTCAAGTATTTTGTCAAAGAAAGTTAA 613330
613331GTTTCAATCCGCGCTCCCGCACGGGGAGCGATGCAACAAGGTCCCAGTTTGTGCCGCTTGCCAGTTCA 613398
613399GTTTCAATCCGCGCTCCCGCACGGGGAGCGATGGCCTTGGCTGAGAGTTGGCCGACAAAAACAGTC 613464
613465GTTTCAATCCGCGCTCCCGCACGGGGAGCGATAGTAAACCGGGTATACGGCTCACTGTCAGCCGGT 613530
613531GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTTATTTGGACTTTCAACAAAATACACACAACGCCAT 613598
613599GTTTCAATCCGCGCTCCCGCACGGGGAGCGATCCCAAGCACGGACCGTAGAGAAAGAGACGACTTAA 613665
613666GTTTCAATCCGCGCTCCCGCACGGGGAGCGATCGGATGTACCGGACGACTGGAAACTACAGCTATG 613731
613732GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTGAGCCGCTTACAAGCATCGTCGCTGATTCAGCT 613797
613798GTTTCAATCCGCGCTCCCGCACGGGGAGCGATAGGATACAAAACGGCATTTGGACTGGTGGCTCCAT 613864
613865GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTTACGATGCTGAGCTTGAAAATATCCGAAAAATA 613930
613931GTTTCAATCCGCGCTCCCGCACGGGGAGCGATACAGGCTGGCGTGCCTTACCAGACGCGCACCTTT 613996
613997GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTCGATCAATAATGGCGTGTGCAATTGTCACAAAG 614062
614063GTTTCAATCCGCGCTCCCGCACGGGGAGCGATGGCTACATTCAGGAATACGACCAGATAAACTCCC 614128
614129GTTTCAATCCGCGCTCCCGCACGGGGAGCGATGCTTGAGCCACGATACTACCAAACTCAAGCACAT 614194
614195GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTAGAAAAAGTTATATCATGGGCCTTACAGGTTGAC 614261
614262GTTTCAATCCGCGCTCCCGCACGGGGAGCGATGTGGCCATTGTGGGTTTCCGCATACATTATAGCG 614327
614328GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTCATGAGAGATAACAGGCCGATTGCTGCGTATAT 614393
614394GTTTCAATCCGCGCTCCCGCACGGGGAGCGATCAGTTCTGTCAATGCTGGATTATAGTTGTAATTAT 614460
614461GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTTATGGGTCACTTGATTATATAGTCGCGATCCGT 614526
614527GTTTCAATCCGCGCTCCCGCACGGGGAGCGATCTGGCGCCCTGGGCGCATATTTCGACAACAGTCA 614592
614593GTTTCAATCCGCGCTCCCGCACGGGGAGCGATCCGCAAGAAGTACAGGACGAACAACAGCCCGATCT 614659
614660GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTACAGCCATCTGAATTGATATGAGCATTTAACCT 614725
614726GTTTCAATCCGCGCTCCCGCACGGGGAGCGATGCCTGCCACTCGGTCCATCTTGCCCCTGTGCGCT 614791
614792GTTTCAATCCGCGCTCCCGCACGGGGAGCGATCGACGAACCGAACGGAGCCTGACTGTATAAATTA 614857
614858GTTTCAATCCGCGCTCCCGCACGGGGAGCGATGATTCGGTAGCTACAATTACAGCATCGCCGATGGTGA 614926
614927GTTTCAATCCGCGCTCCCGCACGGGGAGCGATAACTTTCATGAGCTCAGAAAAAGCAATGAGAAA 614991
614992GTTTCAATCCGCGCTCCCGCACGGGGAGCGATTTCCATTGCCTGGATGATAGCGTATGCAATCGAA 615057
615058GTTTCAATCCGCGCTCCCGCACGGGGAGCGAT615089
Left flanking sequence : Till position 612803 (length bp)
GATTTCATGTGTAAATTACCTGGGATTCGCTGTTAATAGAGCTCGGGATTCTACAACGGGGAGCGATGAC
CGGCTTTCCTGGGAGTCTCATCACCGAGAC
Right flanking sequence : From position 615089 (length bp)
AGACCCCATTATATATCATTATGGTATAATATGTTAGTGGCATTATATCGCGAACCTATTTTTCTGGTGT
TGCCTGGAACTATAGATTCCTTCTCTTTTC
Print the CRISPR sequence : From position bp To position bp