Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_AFXK01000001_4                                                                                                                 top


Strain : Pseudomonas aeruginosa 213BR GCF_000223965 RefSeq :NZ_AFXK01000001 (chromosome circular)
CRISPR id : NZ_AFXK01000001_4
DR consensus (32 bp) : GTTTCAATCCACGCGCCCGTGCGGGGCGCGACNumber of repetitions :12
Begin Position : 5464239 End Position : 5465025

5464239GTTTCCAGCAACTCGCCAAGACGGGGCGCGACATTAACATTTCGAGAGCCTGCGGTACGTGCCTGCT5464305
5464306GTTTCAATCCACGCGCCCGTGCGGGGCGCGACTTGAGGCTGACATGCGCAGGAGAATTGCAGCATGA5464372
5464373GTTTCAATCCACGCGCCCGTGCGGGGCGCGACTTGTGGACCCCGACGTAGCGGTTTGCGCGTTTCA5464438
5464439GTTTCAATCCACGCGCCCGTGCGGGGCGCGACGACCCCGGCACTGGCTTACTGCTGCGAGATCGT5464503
5464504GTTTCAATCCACGCGCCCGTGCGGGGCGCGACGAACGACGGCAAGGCCTTCGGCGAGCCGGCCAA5464568
5464569GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCGTACACCGACAACGCTTCAACTTGGAAACTGGCCCGAAGATGGGCGAGCCCGCGAA5464657
5464658GTTTCAATCCACGCGCCCGTGCGGGGCGCGACTCACGCGCCAGTCAGCAACTCGCTACGTCAGAAGC5464724
5464725GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCCAGCACACCTTCGTGCCAGGAATCCACCAGACCA5464791
5464792GTTTCAATCCACGCGCCCGTGCGGGGCGCGACTTCGGTTCGCCGCGCGGATCGCCAGATGCGAAGA5464857
5464858GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCCCGTCACGCTGTTGCCATCACGCAACTCGACGGT5464924
5464925GTTTCAATCCACGCGCCCGTGCGGGGCGCGACCAGCCCGCTCGCTGTCGTCTCGCCCTGGCAATAAAGT5464993
5464994GTTTCAATCCACGCGCCCGTGCGGGGCGCGAC5465025
Left flanking sequence : Till position 5464239 (length bp)
GGCTTCGTCGGCATGATCGGCTCCTTCATCGTGCGCAGCTACAACCAGGACGTCGACTACTACGTCCAGC
CCGAAGAGATCGAGAAGATCGAAAGCGCCC
Right flanking sequence : From position 5465025 (length bp)
CGCCCTCTTATAACTTATTGATCAGCATGAAAAAAACCTCTTACTTCAGCGAAACATGCCTTCTTTAAGC
AAGGCGCGCGCCTTCAAACTCCTAACTTCA
Print the CRISPR sequence : From position bp To position bp