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NZ_AP011952_15
Flanking alignement tool
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NZ_AP011952_15                                                                                                                 
top
Strain :
Methanothermobacter sp. CaT2 GCF_000828575
RefSeq :
NZ_AP011952 (chromosome circular)
CRISPR id :
NZ_AP011952_15
DR consensus (30 bp) :
ATTTCCATACTATTCAGTCTATTTTAAAGC
Number of repetitions :
75
Begin Position :
966257
End Position :
971263
966257
ACTACCATACTATTCAGTCTATTTTAAAGC
AAGATATACAGCTAGCTGCACTCTTACCTGATATAGG
966323
966324
ATTTCCATACTATTCAGTCTATTTTAAAGC
AAAAAGTTCCTTTATCCCAATCAGCCTTAGTATCAA
966389
966390
ATTTCCATACTATTCAGTCTATTTTAAAGC
AAAAAGTTCCTTTATCCCAATCAGCCTTAGTATCAA
966455
966456
ATTTCCATACTATTCAGTCTATTTTAAAGC
AACGTATCTATCACGGTGTCAATAGACTCATCACTAT
966522
966523
ATTTCCATACTATTCAGTCTATTTTAAAGC
TTTTGGTGGCTATGAAGAGCCTATGATTACGAT
966585
966586
ATTTCCATACTATTCAGTCTATTTTAAAGC
ACTCGCAGCACTCTACATACAGAAATACGAGATAG
966650
966651
ATTTCCATACTATTCAGTCTATTTTAAAGC
GATGATGACCTACTCGTCCTGGCACCACGTGATCATGG
966718
966719
ATTTCCATACTATTCAGTCTATTTTAAAGC
ATATGTTTCATCTTTGTTGTGAGAGTGAATGGCTGTG
966785
966786
ATTTCCATACTATTCAGTCTATTTTAAAGC
GTGGCTAAGGGAGGTTTACATAAAGAACCTCGCTTTAGAT
966855
966856
ATTTCCATACTATTCAGTCTATTTTAAAGC
ACAGCAAAACTGAAGCTGTGAGTAGAGTAGCATACGAG
966923
966924
ATTTCCATACTATTCAGTCTATTTTAAAGC
CACTCAACGCGGAATGGGAATCTGGGACTGATAAGGC
966990
966991
ATTTCCATACTATTCAGTCTATTTTAAAGC
ACATTGGGGGTCCAGTGAGAGAGGCCCTCTCCAAGGT
967057
967058
ATTTCCATACTATTCAGTCTATTTTAAAGC
AAGCAGCTCTCCTCGGTGTGAAGAGGAGTGGTGAGGATGC
967127
967128
ATTTCCATACTATTCAGTCTATTTTAAAGC
TCAGTATCTCATATGATATGTTAGAAAACTCTCTGAG
967194
967195
ATTTCCATACTATTCAGTCTATTTTAAAGC
CCTTCATCATATACCACATCTACTTCGTTATATGTAT
967261
967262
ATTTCCATACTATTCAGTCTATTTTAAAGC
TAAGAAATATAAATAATTTTTATATTTATTATAAAAAA
967329
967330
ATTTCCATACTATTCAGTCTATTTTAAAGC
TTCCAGTTCCTACATTCATTCTTTTTTTGATAATATC
967396
967397
ATTTCCATACTATTCAGTCTATTTTAAAGC
CCAACTCTAAACCCGCTATATCCACATCTGAGCCCAGA
967464
967465
ATTTCCATACTATTCAGTCTATTTTAAAGC
AGGAGGGGTCTTGTATTTTCTTGGTGGGCGTCAAGAA
967531
967532
ATTTCCATACTATTCAGTCTATTTTAAAGC
AATATTGAACCCATATATCCCTGTGAACCCCTTCCA
967597
967598
ATTTCCATACTATTCAGTCTATTTTAAAGC
TTCATCCTCCTTCAGGCCCTTGAGGATTTGCAGGTCTT
967665
967666
ATTTCCATACTATTCAGTCTATTTTAAAGC
CCGCGTCCATCTCAGCCTTAAAGTCCAAGTAGTACT
967731
967732
ATTTCCATACTATTCAGTCTATTTTAAAGC
ATCCATGTTCATGCCGTATGCACCGTCCACAATCCT
967797
967798
ATTTCCATACTATTCAGTCTATTTTAAAGC
CCTTTCCTATACATCATACTATCTCCCTCCGTTTGCTT
967865
967866
ATTTCCATACTATTCAGTCTATTTTAAAGC
AGAAGGAACTGAGTTTCAGGGAATATGCGGCTGAAAA
967932
967933
ATTTCCATACTATTCAGTCTATTTTAAAGC
ACCAGAGACAAACAAACAAACATATGCACATAGAAACA
968000
968001
ATTTCCATACTATTCAGTCTATTTTAAAGC
TTTGTTTTTTTGTTCTTGTCATGTTTTATAGCATTT
968066
968067
ATTTCCATACTATTCAGTCTATTTTAAAGC
CTTTTTTTTATTTGTTCTTTTTCCTGGTTTTATGAT
968132
968133
ATTTCCATACTATTCAGTCTATTTTAAAGC
ATTTTATCACCTACCGAAGATTCATCATATAATTTA
968198
968199
ATTTCCATACTATTCAGTCTATTTTAAAGC
GATTTCTGTATAGATGAACTTGAGGATTTATACTTCAA
968266
968267
ATTTCCATACTATTCAGTCTATTTTAAAGC
TGATCCAGACCCGCTGAATTTTGGGAGAGGACTGGGA
968333
968334
ATTTCCATACTATTCAGTCTATTTTAAAGC
CCTTGGCTCCGTAAACCGATTTGTATGAGACCTCCT
968399
968400
ATTTCCATACTATTCAGTCTATTTTAAAGC
CTCATATAATCCACATCAACCATTGTAATATACCCAT
968466
968467
ATTTCCATACTATTCAGTCTATTTTAAAGC
GATTAGATTCAAGTTGCAGATGGCGTCAACTGACAC
968532
968533
ATTTCCATACTATTCAGTCTATTTTAAAGC
GTGGCCGCATGCAGGGCAATAATCAACCCATTCCATA
968599
968600
ATTTCCATACTATTCAGTCTATTTTAAAGC
CCACGCCACATTTCGCGATTTATCCAAATAGGGATACTG
968668
968669
ATTTCCATACTATTCAGTCTATTTTAAAGC
TTTAACTTTACTAATCGACGGTGGTTCATCATCTCCAC
968736
968737
ATTTCCATACTATTCAGTCTATTTTAAAGC
CTGTATTGTTATTTTTTTGTGTTTGACATTACAAATTT
968804
968805
ATTTCCATACTATTCAGTCTATTTTAAAGC
GATTAGATTCAAGTTGCAGATGGCGTCAACTGACAC
968870
968871
ATTTCCATACTATTCAGTCTATTTTAAAGC
GTGGCCGCATGCAGGGCAATAATCAACCCATTCCATA
968937
968938
ATTTCCATACTATTCAGTCTATTTTAAAGC
CCACGCCACATTTCGCGATTTATCCAAATAGGGATACTG
969006
969007
ATTTCCATACTATTCAGTCTATTTTAAAGC
TTTAACTTTACTAATCGACGGTGGTTCATCATCTCCAC
969074
969075
ATTTCCATACTATTCAGTCTATTTTAAAGC
CTGTATTGTTATTTTTTTGTGTTTGACATTACAAATTT
969142
969143
ATTTCCATACTATTCAGTCTATTTTAAAGC
TAAATTGAATGGTCGTAAACCGGTATATGTTAATGT
969208
969209
ATTTCCATACTATTCAGTCTATTTTAAAGC
GCGTTTTTTGCCACTAAATCACCCATTACATATAGAT
969275
969276
ATTTCCATACTATTCAGTCTATTTTAAAGC
AAGCGGATATCTGCGGGAGACTCCATAGCACCACAGGCC
969344
969345
ATTTCCATACTATTCAGTCTATTTTAAAGC
CGGCTTCTATGTCGTCGATCGCGACCCATACATCCTGAC
969413
969414
ATTTCCATACTATTCAGTCTATTTTAAAGC
AAATAGGTGATAAATATGGTTAAAATAAATAATATTGAAA
969483
969484
ATTTCCATACTATTCAGTCTATTTTAAAGC
TCGACAGGCTCTTCGAAGACCTATACGATCTTGTGA
969549
969550
ATTTCCATACTATTCAGTCTATTTTAAAGC
GCAACATCATTACATTGCATGAGTATAACAAAGTCGT
969616
969617
ATTTCCATACTATTCAGTCTATTTTAAAGC
CATGCCCTGCAACATCACAGGGGCCGCCCCATGCCCTG
969684
969685
ATTTCCATACTATTCAGTCTATTTTAAAGC
TCTTCCCAAATTGCTTCCGCCTCTGCAAGGCACCTCT
969751
969752
ATTTCCATACTATTCAGTCTATTTTAAAGC
AGAAGGACGAGGTAAGGATTGAGCCCAAGTGGAAGA
969817
969818
ATTTCCATACTATTCAGTCTATTTTAAAGC
AAATAAATCTAATAGAAAATACAAATTATATAGAATAT
969885
969886
ATTTCCATACTATTCAGTCTATTTTAAAGC
ATCACTCCACCGGGCAACCCAAAACCCATAGAGACTA
969952
969953
ATTTCCATACTATTCAGTCTATTTTAAAGC
AAAGGAGGGTTTGAAACCACCATCCTGCAGGTTCCTCCG
970021
970022
ATTTCCATACTATTCAGTCTATTTTAAAGC
ACCCACACTTCCTTCGCTATTATCTTCCAGATATCA
970087
970088
ATTTCCATACTATTCAGTCTATTTTAAAGC
CGATGCACCGGATAAGGAAATAAAACCTGCCAGGCCCA
970155
970156
ATTTCCATACTATTCAGTCTATTTTAAAGC
TCTTGCTGTCGCCAATCAGTTCCGATTGGCAATATAGCCTA
970226
970227
ATTTCCATACTATTCAGTCTATTTTAAAGC
TCCCCGGGCTCAACATCCTGTGAGGTTTCAAGGTCTC
970293
970294
ATTTCCATACTATTCAGTCTATTTTAAAGC
GATCAGAGGCCTCCCTCTTCCGATCTGCTGAGTCCAG
970360
970361
ATTTCCATACTATTCAGTCTATTTTAAAGC
AAGGTCGATAAAGTCCTCTATATTCTCTTCACTTATAT
970428
970429
ATTTCCATACTATTCAGTCTATTTTAAAGC
ACTTAAACCGTAAAATATATATATGTGTCTCTCTAAA
970495
970496
ATTTCCATACTATTCAGTCTATTTTAAAGC
AATAGCACTCTTACCCATCATCTGTGAAGCCACGAAG
970562
970563
ATTTCCATACTATTCAGTCTATTTTAAAGC
TCGCGTATGATGGGACGCGATGATTACTGAAGAATGAA
970630
970631
ATTTCCATACTATTCAGTCTATTTTAAAGC
TCCAGTTCCCATATTCATTTTTTTTCGTCAATATCGA
970697
970698
ATTTCCATACTATTCAGTCTATTTTAAAGC
AATTAGTACTCTGCAAGCTCTCTTCTTATGTTCCCGT
970764
970765
ATTTCCATACTATTCAGTCTATTTTAAAGC
CTAATGTGCATGTAACACGACTCGAACACCTCATAAA
970831
970832
ATTTCCATACTATTCAGTCTATTTTAAAGC
GGGTGTGCCAGGCCCCGCTGAGGGCGTCGACCTGGT
970897
970898
ATTTCCATACTATTCAGTCTATTTTAAAGC
CTACTATGCCTATCAATCTACTGCATCGAAGAAACAA
970964
970965
ATTTCCATACTATTCAGTCTATTTTAAAGC
CCACATCACCAGTCCTAAGTTCAGTCTTCGAAAAACCA
971032
971033
ATTTCCATACTATTCAGTCTATTTTAAAGC
AATAGGCTTCCTCCTAGCCATACTCCTCAAAACAATC
971099
971100
ATTTCCATACTATTCAGTCTATTTTAAAGC
CATGGGAAGAAGCTATTGATTTGTTTATCGAAAAAAA
971166
971167
ATTTCCATACTATTCAGTCTATTTTAAAGC
CAGCCCCTTCTTCTTATTCACACCCACAAGGTACACA
971233
971234
ATTTCCATACTATTCAGTCTATTTTAAAGC
971263
Left flanking sequence : Till position 966257 (length
bp)
ATCTTTCTTGTAACCTTTTTAAGTTGATTCCAATACTAAATTTAGTCTATTAAAGCTGGTTATCAGTTGC
AATCTATATAGTTCACGACTGAATTTCCAT
Right flanking sequence : From position 971263 (length
bp)
CGAGCCGATTATTTTGTTTTTAGGCTAAATACTTGCTGAAAATGCTTTGTTTTAACATGCTTATAAGTCT
GCCTATAATGATGACTCTTATTTATAAAGG
Print the CRISPR sequence : From position
bp To position
bp