CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_AP012333_1
Flanking alignement tool
Page manual
  
Home Page
NZ_AP012333_1                                                                                                                 
top
Strain :
Parascardovia denticolens DSM 10105 = JCM 12538 GCF_001042675
RefSeq :
NZ_AP012333 (chromosome circular)
CRISPR id :
NZ_AP012333_1
DR consensus (33 bp) :
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
Number of repetitions :
92
Begin Position :
1334668
End Position :
1340787
1334668
GTTCCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCTCCAGGAGCATTACACCGACCCCGGCAAGGT
1334733
1334734
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCGTAGCGAGGATGGGGGTGCGCTTGTCGGCGTT
1334800
1334801
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CAGACATCTTCGACTTCCTTTCAAAAGTTGGAGT
1334867
1334868
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCTATCTGACGGCGAAAAACCATATCAGGAATCC
1334934
1334935
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGGTGGGCCGGCTGAACCGTCTGGTGGCGGGGTT
1335001
1335002
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TGGCGGCCGACACGTACGTGTGGAGCGTGTGGGT
1335068
1335069
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
AGAGGGGCTTCAGGTTCCGGCAGTAGTCGATGAG
1335135
1335136
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGGGTGGGCCGACGTTTCCGGTGCTGTGAACACA
1335202
1335203
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGGCGACGTGAAAAGTAAAAACGACCAGGACTT
1335268
1335269
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TCAGGCTCCCATCCTTGATGTTCCTTCCCAAAGG
1335335
1335336
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TGGCGGGGTGCTTTCATCCAGGTGAGGATGTCGAG
1335403
1335404
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
AGGGAACTTCACCTCCGCGTGACGGCCGGTCAAG
1335470
1335471
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
GGGATAGTGTTATAATAGAACTATCAATCAATCA
1335537
1335538
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
ATCGACAGGGAGCACCGGTGCTACTGCGAGTATCG
1335605
1335606
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCGTCGGGGTTCACGCTGTTGAGGCTGTTCCCGTC
1335673
1335674
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGTCACCCACCTCGGCCTCGCAGACAGCCACCTC
1335740
1335741
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
GTGCGCCCGTATGGGAATACGGCGACCTTCAATCT
1335808
1335809
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CTCCGACTCCAACCCGGCGGCGGGGACAGCGGA
1335874
1335875
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CACACGCTGTTCTTGTTGACGCCGAGGTGGTTGGC
1335942
1335943
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CAGCGCATTGCCGTACGCCGTGGCGTTGCTTCTCAA
1336011
1336012
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
ACTCCGGATAACCGATTTATCAGTTTGGCTTGGAT
1336079
1336080
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
AGACAGGCTGGAGCTGACCTGCGACCAGTGGGC
1336145
1336146
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TAACGTCGACGCCAAGACCAGGCTTCTGGTCAA
1336211
1336212
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CTCAAAAGCAACCACAGCGTCGACTACGCGAGAC
1336278
1336279
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
GCGGAGGATTGACGAGACCCGCCTCCGGGGATT
1336344
1336345
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TACTGCCCGTCCTGCGGCAGGAAGGTGCGCCGGGT
1336412
1336413
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TCACGCCATTCTGTGTAGCATATGTTACATTTCT
1336479
1336480
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCAGGATTCCAAGTCAGCGATGACCTTTTCGCG
1336545
1336546
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CAAGACGGATGTCGACGACTCCACCAGCGAAGG
1336611
1336612
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CAATCAAGGTGAGCTTGCTCCCCTCCCCGGTCCA
1336678
1336679
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCGGCTATCCGGAGCAATCCATTAAGGGGTGT
1336743
1336744
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
GAAGAGCGTCTTCCAATCATCCTTATTACCATA
1336809
1336810
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
ACTCCGTTTCCGTGAAATGCAGGACGAACCGTT
1336875
1336876
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CATCATGGCAGAGAACGGGCGTGCCGTCAGCCA
1336941
1336942
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TGGATGCGGAATAAATATGCGGTATATTTATTCT
1337008
1337009
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGCAAATGTAACTTAGATTATTAAGCATGTACC
1337074
1337075
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TGTTGATGACGAGGATGCGGCCGGTGGGTGTCAT
1337141
1337142
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
GATATGATCAGATAAGCTACTAAGGAGGATGGCA
1337208
1337209
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
ACGTATGATAGGCGACAAAGCATGGGACCTCGAC
1337275
1337276
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CATCGCCGACCTGGAGGCCTGGTTGGCCAAGCAAG
1337343
1337344
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCATGGTAGGTGTCCTTTCTGGTTAGTTTTTACC
1337410
1337411
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCATCAGCCTGGCGACTATGGTCCGTAATGGTC
1337476
1337477
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TTCGCCGCGTCGGCCCGGTCGCCTCGTCGTCGGG
1337543
1337544
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TAAAAAGTTGCGATAGAGAGCCCGGCGAGTGGG
1337609
1337610
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TGATAACAACGAGGACAGTATCAATATTCACGCT
1337676
1337677
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CACCGGCTATCCGGAGCAATCCATTGAGGGATGT
1337743
1337744
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCCTGCTCAAGAGGGCCGGAAAAGAAGGATATTG
1337810
1337811
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGAAAAGCCTGCCCCTCGTGTATAATAGGGAGCT
1337877
1337878
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGTCCGTGATGAGCCGCTCCCCTTTCTCTTCCGTC
1337945
1337946
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CTCAATCGGTGGATTTTTATGACCTACACCTCA
1338011
1338012
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCGTGGCAGTTTGTCTTTTATGTAGGTCGGACTTT
1338079
1338080
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
ACCGTTCCACTCTGTTTGCCTTGAGAGCGGGAGA
1338146
1338147
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TGCACAGTTTTAAAAAGTATGCGATGCCGGGGAT
1338213
1338214
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TGGATGCGGAATAAATATGCGGTATATTTGTTCT
1338280
1338281
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
AACATCAAAAGTATGCATAGGGGCCAAACATACA
1338347
1338348
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
AGGTGGAGCCGGAAAAAATCGACATCAACGGTCT
1338414
1338415
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
ACCTGAGCACGCTCCTGGGCGTCATCCTTGTCCC
1338481
1338482
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TTGAGGTATCAAGGAGGTTAAGATGCGTTTACAG
1338548
1338549
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGATGTGTGGGATCTCGACCGATGGGATGACGT
1338614
1338615
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TGGGGTTTGGCGGGGCCGGTCACCAAGTCTCGGC
1338681
1338682
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CATGGTCATGCGGGTTGCCCGTTACTCGCCGTT
1338747
1338748
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CTTGGATCAGGACAGTCTCGTTCTTGACAGGAC
1338813
1338814
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TTTTCTCGCATATGGCCCCATGCGTAGCGAGACG
1338880
1338881
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
GTCCTTTGACAGATTTTTTGGATAATGTCGTGTG
1338947
1338948
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCAGACCGACCAGGGGCCGGTCACCAAGTCTCGGC
1339015
1339016
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
GGATCTCCCCTTGTCTCATGCCGGTCAACAGACG
1339082
1339083
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CATCGTGGATTCCGGCCACTCATCCAGCAGCTC
1339148
1339149
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
GCATCAGTATCAGCTTGGTAAGGATGGTGATAAA
1339215
1339216
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
GGGCCTGCCGGATGGGCGTCTGCTGGCTGGTGGT
1339282
1339283
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TTACCGTGTCTGATAAAACAAGGTTGGAGACTTG
1339349
1339350
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
AGTTCCAAAAATGGTTCGTGCTTCTACCGGGGT
1339415
1339416
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCGTCAAGCCAGTCGGCGACGTCGACAAAGTCGCG
1339483
1339484
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CTGGGCCGACCCCGGAAAGAGACACGCTCAGAA
1339549
1339550
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGTCAAGCCAGTCGGCGACGTCGACAAAGTCGCA
1339616
1339617
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGCAGTAGCAGTCCAAGTTGGTCCCATAGCACGG
1339683
1339684
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGCTTCCGGCGAAGCCGAACCCGTCGCCCGTGCT
1339750
1339751
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CCGTCCACGGTGGGGAAGGTTTACCGGGTTGA
1339815
1339816
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TTGCAGGAGGCCATCGGCAAGCAGACCGCCGTGCT
1339883
1339884
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
AGGTTATGCGATCCAATGGCCCGGCAATGTGTGG
1339950
1339951
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TGAGTTCCTCGGCATGGATAATGTATTTGAGTT
1340016
1340017
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGCCGGGCGGGATAAAAGCCCCGCACCGGGTCGT
1340083
1340084
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
ATGAAAACAACGTGAAGGACGATGAGAATCAGGAG
1340151
1340152
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TCTTCAAACCTATCTTATAAAAATACGGGTTGTT
1340218
1340219
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TTCAAAGGCGTTTCATTTCCTCCTATCCGGTCAT
1340285
1340286
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
GGCTGCCCCAGCTCAATCATATACGATAACACAA
1340352
1340353
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
ATAACATTGTCATGCAGCTTTTCGCATTCTACGA
1340419
1340420
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CGCTGATAAAACCGATTGAAGGTGAATAATCAT
1340485
1340486
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CACTTCAATGATAGGACTGGTAATCCAATCAGTT
1340552
1340553
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
CAGGATGAGTACAAACCTGAGTATTTCGTCGAT
1340618
1340619
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
AGGGACGGGGGGAATGTTCATCGCAATGTCTTCAA
1340686
1340687
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
TTTGACCTTGTTGTATGTGAGCCGGTTTATGATTT
1340754
1340755
ATTTCAATCCACGCTCCCCTTGCGGGGAGCGAC
1340787
Left flanking sequence : Till position 1334668 (length
bp)
TACCCAGCAGAAACGATCAATCACTGGAGGACTGACATTTTTAATCTATCCATTGTGAAAAAATCCATCA
TGACACTAGCCACATAGTCATCAGCATCAG
Right flanking sequence : From position 1340787 (length
bp)
CGCAGAAATGGACAAATAATCTCAGAAATCAAGACACGAATCCATCTCTATTCCTTTATTCTACCTATAA
GAGGCAGAGAATTGACGCTTTTGTCATAAA
Print the CRISPR sequence : From position
bp To position
bp