Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NZ_AP014510_1                                                                                                                 top


Strain : Thermotoga profunda AZM34c06 GCF_000828675 RefSeq :NZ_AP014510 (chromosome circular)
CRISPR id : NZ_AP014510_1
DR consensus (30 bp) : GTTTCCATTCCTCTTAGATTCGATTGAAACNumber of repetitions :89
Begin Position : 238239 End Position : 244124

238239GTTTCCATTCCTCTTAGATTCGATTGAAACTCGAAGAATGGAGAAAAATGGGTTTTAATGTAATCT238304
238305GTTTCCATTCCTCTTAGATTCGATTGAAACTTTTTATGAATTCCTTGGGTACAGTAGTCATTCATTT238371
238372GTTTCCATTCCTCTTAGATTCGATTGAAACTATGTATAGTGCTTGCTCAGGATTCATTGTCTGTGTG238438
238439GTTTCCATTCCTCTTAGATTCGATTGAAACAATGCTGGGTGTCCATGACAGCTGTGAGCCGTCCTT238504
238505GTTTCCATTCCTCTTAGATTCGATTGAAACGTTTGACTTTTTCGATCAACTCAGAGGGTAGAATTG238570
238571GTTTCCATTCCTCTTAGATTCGATTGAAACGATTTTTGCAAAACGAAAACCATACCATGTGAAAGA238636
238637GTTTCCATTCCTCTTAGATTCGATTGAAACATTATGGAGTACAACAGAGAAATGGGTATTACTTTAT238703
238704GTTTCCATTCCTCTTAGATTCGATTGAAACTTGGGTGCCCATGCACCCAAAAAGGAGGGAAATTTA238769
238770GTTTCCATTCCTCTTAGATTCGATTGAAACTGGGTGCATGAGCACCCAAAAAAAGGAGGGAATTTTA238836
238837GTTTCCATTCCTCTTAGATTCGATTGAAACCAGTTCTTCCACCATGATATGCATTTCTTTCTAATT238902
238903GTTTCCATTCCTCTTAGATTCGATTGAAACGGGGGTGAGATTAATAAGAACAGAGAAAGGAACAC238967
238968GTTTCCATTCCTCTTAGATTCGATTGAAACTTACACGTTTGACTATTGACATGTAACAAATATCAAA239034
239035GTTTCCATTCCTCTTAGATTCGATTGAAACTTACCACGAATCGACGGTGCTATTGAGTTGAATTC239099
239100GTTTCCATTCCTCTTAGATTCGATTGAAACTCAGAGGTCTTTATAAGCACTTCAAAGTGCCAGTTGT239166
239167GTTTCCATTCCTCTTAGATTCGATTGAAACAGATTCTCCACGCTTTGCTCATACACAGCAAGCAAC239232
239233GTTTCCATTCCTCTTAGATTCGATTGAAACTTGAAGGTAATCACGAAGCGAGAACGAGGAAGCAGGT239299
239300GTTTCCATTCCTCTTAGATTCGATTGAAACCCCGCTTTTACTGTTTCAGTACCACTTGCAATCAGT239365
239366GTTTCCATTCCTCTTAGATTCGATTGAAACTTGCATCCGAAGCAATGCAACCATTATTCGATGCGT239431
239432GTTTCCATTCCTCTTAGATTCGATTGAAACGATGCCTCAACTAAAAAAGATGCACTTATAAAACTCA239498
239499GTTTCCATTCCTCTTAGATTCGATTGAAACTTGAAGGGTATGGCATTCAGCCCAATCCTAACACATA239565
239566GTTTCCATTCCTCTTAGATTCGATTGAAACCATTGATCGAAAGAATTGCTGCTCTGGAAACGAAAGT239632
239633GTTTCCATTCCTCTTAGATTCGATTGAAACCGTTTCTCGTACTATGCTTGAATTACCACGAATCGA239698
239699GTTTCCATTCCTCTTAGATTCGATTGAAACCAGGCCTTTTTGCTTAGTGAGGTGAGAACAATGCCTT239765
239766GTTTCCATTCCTCTTAGATTCGATTGAAACCCAACTGCAGAATTTCAGGATCATCCGTTTCTACCA239831
239832GTTTCCATTCCTCTTAGATTCGATTGAAACTTGCAAAACGCTCACCAAGATCGGCAATGGTCTTTAA239898
239899GTTTCCATTCCTCTTAGATTCGATTGAAACTCTCGACTATCTTCATCATCTTGTGAAAGCTCATTA239964
239965GTTTCCATTCCTCTTAGATTCGATTGAAACCGGTGAAGATCATGACGAATCAGGATTCAGGATTGT240030
240031GTTTCCATTCCTCTTAGATTCGATTGAAACGAAAAAGAAAAGCCCGCATCAAAGCGGGCATATCTCG240097
240098GTTTCCATTCCTCTTAGATTCGATTGAAACACAATTCAGCGTCAAGTACAGACTTAGCCTTACTACA240164
240165GTTTCCATTCCTCTTAGATTCGATTGAAACCAAAATTGTAGCCACTATTCCTGCAAACTCGGACTGGA240232
240233GTTTCCATTCCTCTTAGATTCGATTGAAACAATTAGAAGCAGGAAAGAGACAACCATCGCTCCGAT240298
240299GTTTCCATTCCTCTTAGATTCGATTGAAACCTGCCAAAGAAGTCTGTTTATTTCTGTTATCTTATC240364
240365GTTTCCATTCCTCTTAGATTCGATTGAAACAAAGTACTCCTGCACCGAAAGTAAAAGTTTCGCCAGA240431
240432GTTTCCATTCCTCTTAGATTCGATTGAAACCTGGCAAGGAACGCTGGGTATACAGTAATGTTTTGA240497
240498GTTTCCATTCCTCTTAGATTCGATTGAAACGGTGGAGTGTATGTTAAAGGTTATTGGTGAGAGTTT240563
240564GTTTCCATTCCTCTTAGATTCGATTGAAACGTTAGTGCATTAAGTGTTGCGTTTGTAGTGAACTGGA240630
240631GTTTCCATTCCTCTTAGATTCGATTGAAACGGTTGAGAAAGACAGATCCTGAAGCCTGCAAAATCCT240697
240698GTTTCCATTCCTCTTAGATTCGATTGAAACTTTGGTTGACGAAGCAAACATATGGTTTAGTTCTCG240763
240764GTTTCCATTCCTCTTAGATTCGATTGAAACGGGGTTCGTATTATCCAGACGCTTTAGTTCGTGTATA240830
240831GTTTCCATTCCTCTTAGATTCGATTGAAACCTATGTTGTGCCCACCAATTCAGCAAATCTTTGTCCCT240898
240899GTTTCCATTCCTCTTAGATTCGATTGAAACAATGCATCAACAAGTTGTGCACCTTTTATAGTTATG240964
240965GTTTCCATTCCTCTTAGATTCGATTGAAACATCTATGCTTAAATGTGGCTTTAAAATTATTACACACG241032
241033GTTTCCATTCCTCTTAGATTCGATTGAAACCAACACCACTCATGTCAACATTTACATTTAATGTATC241099
241100GTTTCCATTCCTCTTAGATTCGATTGAAACAAGAAATTTACATGATTTTCTGATTATTTGTAATAG241165
241166GTTTCCATTCCTCTTAGATTCGATTGAAACCACTTGATCTTGCACTTGTTGGGGTCAAGAAAATAATC241233
241234GTTTCCATTCCTCTTAGATTCGATTGAAACTGTTCTTGCGAACGCGAAATAGTTATGAAAAGTGTGTA241301
241302GTTTCCATTCCTCTTAGATTCGATTGAAACCGTGTGAAGGCTGGTTTATCATCAGCCCTGAGTCGAT241368
241369GTTTCCATTCCTCTTAGATTCGATTGAAACTGGCTTCCAGGGTGGAAGGAAGCAACAGAAAATTGG241434
241435GTTTCCATTCCTCTTAGATTCGATTGAAACGTCTGTATCACAATAATATACATTTTGCCATCCTGTTTC241503
241504GTTTCCATTCCTCTTAGATTCGATTGAAACTTATCGGATTTGGAAAGAGCAGATCGAGCTCGAACAG241570
241571GTTTCCATTCCTCTTAGATTCGATTGAAACTGTCTTTAGTCTCGGTAGATGTCGAATTGTTCACAA241636
241637GTTTCCATTCCTCTTAGATTCGATTGAAACCTCCTTCGCAAAACTGCATTTTCTGGTATTAAAGTT241702
241703GTTTCCATTCCTCTTAGATTCGATTGAAACACTAAAGAACGGCTCACAGTCATGGACACCCAGCAT241768
241769GTTTCCATTCCTCTTAGATTCGATTGAAACCAATTCAATATCTGCTCTAAGAACGTTTGCATTGTA241834
241835GTTTCCATTCCTCTTAGATTCGATTGAAACCTGAGCAACACGCTTGAAAAGATACCTTACGATGTTC241901
241902GTTTCCATTCCTCTTAGATTCGATTGAAACTGTGACGGGAGCAGAACTATCATCAGGAGTGAGAACT241968
241969GTTTCCATTCCTCTTAGATTCGATTGAAACTGAGTTGTTTGAGATGAAAAAGCAAGTCTTGATCCG242034
242035GTTTCCATTCCTCTTAGATTCGATTGAAACTTGGTTGTGTTGGTGTTTTGCCTTTCAAGCGTGACTC242101
242102GTTTCCATTCCTCTTAGATTCGATTGAAACTGCCAATCTTCGTGCACTCATGCCTGTTTGAACCGA242167
242168GTTTCCATTCCTCTTAGATTCGATTGAAACGTGGTGATCGTTTCAAGATGCGATTTTTTGACTCAT242233
242234GTTTCCATTCCTCTTAGATTCGATTGAAACATGGTGAATGGAAAATTTCTTGCGCAGGACTTCTGG242299
242300GTTTCCATTCCTCTTAGATTCGATTGAAACAAGTTTGTTTTTGAACAGCAAGCGGTATCGAATCTCT242366
242367GTTTCCATTCCTCTTAGATTCGATTGAAACACGATGTTGACAAAGCCCAAGCAAATGTAAATGTCA242432
242433GTTTCCATTCCTCTTAGATTCGATTGAAACCCTGCGGCAGACAAAACACGTTCATACTCTTCAACCAG242500
242501GTTTCCATTCCTCTTAGATTCGATTGAAACCCTGCGGCAGACAAAACACGTTCATACTCTTCAACCAG242568
242569GTTTCCATTCCTCTTAGATTCGATTGAAACATTTTCCATTCACCATCGACGTATTTTTTGTAAGGA242634
242635GTTTCCATTCCTCTTAGATTCGATTGAAACTGTAAGGATAACGCTTGTTTTCAGAATCCAAGAAAG242700
242701GTTTCCATTCCTCTTAGATTCGATTGAAACGTGATGGGGGGGTTTAACCTCCCCGTTTTGAAAGGAG242767
242768GTTTCCATTCCTCTTAGATTCGATTGAAACTCAGCCACTCTATATCACCTTCAAAACCGTTGTAAGA242834
242835GTTTCCATTCCTCTTAGATTCGATTGAAACGCCTGATAGTACTCTTACCTGTGATCTTGGCTCTCT242900
242901GTTTCCATTCCTCTTAGATTCGATTGAAACCTCTCATCGCGTTGAATCGCTGTTTTTTCTGTATATAT242968
242969GTTTCCATTCCTCTTAGATTCGATTGAAACTTTTTTCTTCTGGAGAGTTGTTTATCAGCAACGAGA243034
243035GTTTCCATTCCTCTTAGATTCGATTGAAACCCAAATGCGAGCGCTAAATTATCGGGAGTTGCATCGAG243102
243103GTTTCCATTCCTCTTAGATTCGATTGAAACATGGTAGATGTGATATGCCAGATCATCTCGTTGCTGA243169
243170GTTTCCATTCCTCTTAGATTCGATTGAAACTTGTTGGTATTTACAGAGTAATCACGTCTGAAAAGA243235
243236GTTTCCATTCCTCTTAGATTCGATTGAAACGCAAGTTGTTCGCTTGCGGTTTAGGTTGCTCAGTTT243301
243302GTTTCCATTCCTCTTAGATTCGATTGAAACCTCTTTCAGAACGTTGCTGATTCTTCATTTCATCAA243367
243368GTTTCCATTCCTCTTAGATTCGATTGAAACGCGTTAGAAGATTATAAAAAGGAGATGTGGCAAAAGA243434
243435GTTTCCATTCCTCTTAGATTCGATTGAAACGTTATAAGCGTCGTGAGGATAACCTTACGACGCTTT243500
243501GTTTCCATTCCTCTTAGATTCGATTGAAACGTATGGTTTCTGATTTAACGGTAACTGGTTTCTTGT243566
243567GTTTCCATTCCTCTTAGATTCGATTGAAACTAAGTAGTAAGAGTGAGATATACTTCTTCATCAACA243632
243633GTTTCCATTCCTCTTAGATTCGATTGAAACCTTGAAGACAAAGACATTATGCATGTTGAGGTTACTT243699
243700GTTTCCATTCCTCTTAGATTCGATTGAAACGCTTTCCACCAACAGTCTCTTCACGTGATTCAGGGA243765
243766GTTTCCATTCCTCTTAGATTCGATTGAAACTGCAATTGAATGTGTAAATCTTGTTGTTGAAGAAAT243831
243832GTTTCCATTCCTCTTAGATTCGATTGAAACTATTATAAATCTTTCAAAACTGCAGAGCGTAGAAT243896
243897GTTTCCATTCCTCTTAGATTCGATTGAAACGAGGTGCCTTTATGAACACATATTTGAAGTATTCGT243962
243963GTTTCCATTCCTCTTAGATTCGATTGAAACTGATTATGAGTGTATTGTATTAAATAGATTGAAAGG244028
244029GTTTCCATTCCTCTTAGATTCGATTGAAACTGAGAATCAATCTGTTTATAGTCAAATACTTCTCCT244094
244095GTTTCCATTCCTCTTAGATTCGATTGAAAC244124
Left flanking sequence : Till position 238239 (length bp)
AATGAAAATGGTGAAGTTTTGGAAATGGCTTTCGATTGGTATGATTTAACAGATTCACTATATGAGGAAT
CTGAAATATTTGTTCGGTTTGTTTCCAGCC
Right flanking sequence : From position 244124 (length bp)
TCATATTATTCTTAATAGAATATTATCATAAGATTTTATATTTGTCAAAATTAGCTTTGCTACGGGGAAT
AGAATAAAACTAATACCTTAGTGAATTCAG

Print the CRISPR sequence : From position bp To position bp