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CRISPRs details
NZ_AP014510_3
Flanking alignement tool
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NZ_AP014510_3                                                                                                                 
top
Strain :
Thermotoga profunda AZM34c06 GCF_000828675
RefSeq :
NZ_AP014510 (chromosome circular)
CRISPR id :
NZ_AP014510_3
DR consensus (36 bp) :
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
Number of repetitions :
36
Begin Position :
1100827
End Position :
1103530
1100827
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
TTGAATTCGAAATGGGTTCTATAACAATAGAACCCGACATA
1100903
1100904
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TTGAATTCGAAATGGGTTCTATAACAATAGAACCCGACATA
1100980
1100981
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TTGAATTCGAAATGGGTTCTATAACAATAGAACCCGACATA
1101057
1101058
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
GCACAAATAGCCAAAACAGAAAAAGGTACATTAATACTCAA
1101134
1101135
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
TATATGATCCCGCAAACAACGGGCTGTATAGAAGAGATATT
1101211
1101212
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
CAACTGCTGAATTTGATTTTTGTGAAGTAGAGGGGGTGTTT
1101288
1101289
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
CCGCAGCAACGCCAACGCAAAAGCTTCTCTTCCTGGTAA
1101363
1101364
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ATTACATACACTCGTTCAATATGGATATTCTAAAGTTAG
1101438
1101439
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TTGAATTCGAAATGGGTTCTATAACAATAGAACCCGACATA
1101515
1101516
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ACAGAGTCGCAGTATACGTGAAAAAAGAGGAGGAAGGATC
1101591
1101592
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TCTTTTCATGGTCACAAACGACATCGAAGCTGTGTCAACG
1101667
1101668
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
AACTAGATCAGATCTCCCCCTGCTGGTCGACCAGCAGGGG
1101743
1101744
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TGGATTCGTCAGTGCGATCGGACACGCAGATACCGCAAAT
1101819
1101820
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
TTGTTGCCGAGTTGGGTCTTGGACGTGTGTCCAAGACCCA
1101895
1101896
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
GCAGCAAGAAAAGTCGGTGTCGTCGAATTCTTAATAAAAA
1101971
1101972
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
CATCCTTGGCTAAATCAAGTCCGGCGCAAAGACTTTTAT
1102046
1102047
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
AAAATGATACACATAACAAACGCAGTCATAATACCAACA
1102121
1102122
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
AGCACGAGGGACTCCCTCTCGTGCAACATTGTGTGCACGTG
1102198
1102199
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ATCCAGCCACAGCAGAAGTCCTTGCAAAAGCGACAGTCGC
1102274
1102275
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
ATCCAGCCACAGCAGAAGTCCTTGCAAAAGCGACAGTCGC
1102350
1102351
GTTTCCATCTCTTTCAGAGAGAACCTTCTTTCGGAC
CCACACCCGATAACGTAGCTATTGCCGTACTCAGAGAAAA
1102426
1102427
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
CCCTGTAACCCGGGTGGGCGCCCACCCGGGTTGCAGATG
1102501
1102502
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
CGGCGTCTATTGAGGCGCTGTAGAACTTCGCTAATATAGG
1102577
1102578
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
ATCCTTAAGGTTTGTGTTCATTTGTTCTAAAGTAGAGATCTGT
1102656
1102657
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
AGGTGGCGAAGATAGCAGATGTGATTGTGAGTCCGAAAGG
1102732
1102733
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
CAGCTCGGAAGTTCCGAGCTCCCCCTGCTGGTCAACCAGCAG
1102810
1102811
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
ATGAAAGGTATAGTTCAAATGGCAATTGGTGGTGTAGTTG
1102886
1102887
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
TTTTTGGAAAAAATTTGATTTTTGATGTACTGCCAACAG
1102961
1102962
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
TATATTATGATTTTACTTTTAAGACTTTGAATTATGAGAAAG
1103039
1103040
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
GTGGGATAGGATTTGGTTTGACTATGTTAGCAGTATGGAT
1103115
1103116
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
GCTGTCTAAGATGGGAGGTTGAGGCTGATGATTAAAACG
1103190
1103191
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
TGAAGATAGCTATGCAAGATGAAAATTTTGATGGGATAAT
1103266
1103267
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
TAATCAAAGCAGATTGTTCTGGATCAATAGTGACGTCAA
1103341
1103342
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
ACAGACAAGGCTATATAATCGTGTTTCCTTACTATGCTAA
1103417
1103418
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
GGATCAGAGGACTGAGGAAAAAGAGAGCAAAGAAGACAGCG
1103494
1103495
GTTTCCATCTCTTTCAGAGAGAGCCTTCTTTCGGAC
1103530
Left flanking sequence : Till position 1100827 (length
bp)
AGAATATCTGTCAACACACAAGGCTAAATTTGGAAAACTTTCAGAGAGTTTTCTTTCGAACAGTTCATTA
AATAAAAAATGCGGGCATTAAGCCCGCGTA
Right flanking sequence : From position 1103530 (length
bp)
CGTACATTTCTAAGTATATCATAAGTAAAGGACTATTTGTGCTTAAAATTCATAACCTGGTGTTAATAAT
GTTAGTGCATGTCTAACATCAACCCTTTTT
Print the CRISPR sequence : From position
bp To position
bp