Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_AP014926_1                                                                                                                 top


Strain : Prevotella intermedia GCF_001548195 RefSeq :NZ_AP014926 (chromosome circular)
CRISPR id : NZ_AP014926_1
DR consensus (36 bp) : GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACNumber of repetitions :17
Begin Position : 340163 End Position : 341247

340163GTTGTTTGTGCCTTGCAAACAGCAGGCAGATGCAACAAAAATCAGTCCTTCCGCTATTGGAATGCT340228
340229GTTATTTTTACCTTGCAAACAGCAGGCAGATGCAACAGCTGAGTTTGAAGCTAAAATTCTCGCTGA340294
340295GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTGTGTTCTAAAAGAGTACATTACCATAGG340359
340360GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTTTTATCTACTTTCACGTATTGTTAAGGA340424
340425GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTTATTATCACACTGTTAAAGATTGGAGTGA340490
340491GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACAGAAACAAATATTGAGGAAAAATTAAAATC340556
340557GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACGGTAAAGTGAACGAGCTCATTGCCAACAA340621
340622GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTAGGTCAATTGTGCCACAAAACAAATAA340685
340686GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACTTGTTCTTAGATGAGTTAACCACATGTAAT340751
340752GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACCTTACTACTTTCATTGCTAACGTACTCTTG340817
340818GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACGTATGGTTACGAACTTGTTCTTGCCAGAGT340883
340884GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACTGGTGCTAAGAGCGTAAAGGACCTTAAGGT340949
340950GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACAGATACTATAATAGAACTATATCAAGAATT341015
341016GTTGTTTTTACCTTGCAAACAGCAGGCAGATACAACATACAGGAGCAAGAATAGAACTATTAAGAA341081
341082GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACTTATTAGATTATCGCTTTGTAGTTGATGT341146
341147GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAACGGCTATGGAAAACGTAGACGCAAACGCTA341211
341212GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC341247
Left flanking sequence : Till position 340163 (length bp)
AAAAATATTTACACCTTTCTCGCCTTTTTTCACCCATAGAAAGGCGTGTTCCCCCTTCCGTTTTTACTTC
CCCCAATTCCATTCCCTTGCTTGTTAATAA
Right flanking sequence : From position 341247 (length bp)
GCACCTAACCTAACTGTCTGATTCTTATATGTTTTGTTTCTTTCTTTTCCAACACCATTTTTTCCCCTTC
TTATTATCTAATTGTAAATCTCGTTGTTTT
Print the CRISPR sequence : From position bp To position bp