Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_AP017367_23                                                                                                                 top


Strain : Leptolyngbya sp. O-77 GCF_001548395 RefSeq :NZ_AP017367 (chromosome circular)
CRISPR id : NZ_AP017367_23
DR consensus (35 bp) : GTTTCAGTCCCCTTGCGGGGAAGTGGTGGTGAAAGNumber of repetitions :8
Begin Position : 5227326 End Position : 5227883

5227326CTTTCCGTCCCCTTGCGGGGAAGTGGTGGTGAAAGGATCGGCTTTTTTTCAGGGCAACTCGTCGGCCCCCAAACTA5227401
5227402GTTTCAGTCCCCTTGCGGGGAAGTGGTGGTGAAAGCGCAGGATGTCATCGGGGCATTCAATCGTGCAGCCAAT5227474
5227475GTTTCAGTCCCCTTGCGGGGAAGTGGTGGTGAAAGCGAAACTCTCCGTGGCGAAAGAGAGTTGGATCGGATTCGG5227549
5227550GTTTCAGTCCCCTTGCGGGGAAGTGGTGGTGAAAGGTGGCTTGTCTGATCATTCTTGGCGCGGCGCGGTAGGAGC5227624
5227625GTTTCAGTCCCCTTGCGGGGAAGTGGTGGTGAAAGATTGGCGATCAACTCACTGGTATCAACGACGGCATTGAAG5227699
5227700GTTTCAGTCCCCTTGCGGGGAAGTGGTGGTGAAAGCAGTGTGTATCTGTATTACCTCTGTCACCACTGGACAGGTGA5227776
5227777GTTTCAGTCCCCTTGCGGGGAAGTGGTGGTGAAAGCTAGGCACATACATGAAAGAACCATGTCCTTTATCCA5227848
5227849GTTTCAGTCCCCTTGCGGGGAAGTGGTGGTGAAAG5227883
Left flanking sequence : Till position 5227326 (length bp)
GAGGGAAGAACGAAGAGGGCAGAACGAAGAGGGAAGAGGGAAGATTTGGGATGTCTTAGCTTTTCTTTTT
TCGTTTTTCGTTTTTCGTTCTTTCCCAAAG
Right flanking sequence : From position 5227883 (length bp)
TGTGCCGTCTGAAACTTTGTCTGGACAAAGCTCCCAGAGCAAAAATCGACACGATCTTTCTGAAGTGGCA
ATAAAGCAAAGAAAAGTGTCACCAGGACTT
Print the CRISPR sequence : From position bp To position bp