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CRISPRs details
NZ_CP006019_3
Flanking alignement tool
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NZ_CP006019_3                                                                                                                 
top
Strain :
Palaeococcus pacificus DY20341 GCF_000725425
RefSeq :
NZ_CP006019 (chromosome circular)
CRISPR id :
NZ_CP006019_3
DR consensus (30 bp) :
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
Number of repetitions :
32
Begin Position :
1426423
End Position :
1428518
1426423
TTTTTAGTTCTCTTAGAGTCTTATTGGAAC
TGCACCTAAGGTTAAAGAACTTATCGCTCCTATTGC
1426488
1426489
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
TCATAGATGGCAGAAAATTCCGCTTTTGGCAAGAAACA
1426556
1426557
CTTTCAATACTTCTAAAGTCTTATTGGAAC
TGGAGGGGTGAGCGGTGGCAAGTAGGAAGAGAAAACTT
1426624
1426625
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
TTTCCTCAGAAACCCAAACATCAATAGACCAGACCC
1426690
1426691
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
GTTGGTATAGAATTATTTGACAAATTCAGCGATAAGA
1426757
1426758
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CGGTTATAAAGAGCTTTACAAATACGAAAACGGCCGA
1426824
1426825
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CTGTAACAGGATTATAAACCTCCTCAGCCCCTATTG
1426890
1426891
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
TTTTGGAACTGCACCGTAGTAACTCCAAAATTTATAA
1426957
1426958
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
GGTGAACAACACTCCAAAAGCCGGTCTAATCTATGTT
1427024
1427025
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CAGGATAATTCAAACGTTTACATTGACAACAACCAT
1427090
1427091
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
TAACCCTAAGCTTTTCCCACAAGTACTAAAGTTTACA
1427157
1427158
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CTTTGAGGACAAGGTAGATAGAACAAATGAGTTCTT
1427223
1427224
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
TGCAGCAATACACAAGCAAGACAATCACAATAAACGT
1427290
1427291
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
GCTTTTACTACTCGTTTCAGGCCTTTTGCAAGTATGA
1427357
1427358
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CCGCCCACCAAACCCCTTTCGATTAAAACCTACTT
1427422
1427423
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
GAACACTAGGCAAAGGGTAAAAGAGTTATACGAAAG
1427488
1427489
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CATATCTGTTGCATACACTACTGCTTCGCTGAGGATA
1427555
1427556
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
AGAGGGTGAGGATTTAACGATTATTAGATTTAGCAC
1427621
1427622
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CCATTTGAACATTTTGAACGCTTAGAGGTTTGTAATT
1427688
1427689
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CTTGCACCCAGCAGTATCCATGTCTGAGATTACAA
1427753
1427754
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CACCGGATTGGGTTGTTACGCTATTAGCCGCTTTAT
1427819
1427820
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
TTAAACAGTCAGAACTAAAACAAATACTGAGCAAGAT
1427886
1427887
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CCTCGAAGGGGATAAAATAATAATTGAAAAAGCGAA
1427952
1427953
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
TCATAGCTAGTGCCGTTTCTGAAAACAATGAAGTTAA
1428019
1428020
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
TGTGATTATTGTGAATATTGTTTTAGTATTGTTAG
1428084
1428085
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
AGTTCCTAACCTGCCTATCAGAAACCCCCAGTATCC
1428150
1428151
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CGATTCTCCGATCACAATGGCGAACATTGCCCAGAGCT
1428218
1428219
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
CCTCTTAGTCCGGTTATAACTGATGAGTATAGAGTAG
1428285
1428286
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
AGCCAGCCGTGCAGCTCGCTTATGTAACCCTCCCAAA
1428352
1428353
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
TTGCTAAAGCCAAGAATCTAGCTAAAATTCCAAGAA
1428418
1428419
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
TTGAAAGGGATGAAATGACGGGTGAATGGATGTTTAAAGC
1428488
1428489
CTTTCAATTCTTCTAAAGTCTTATTGGAAC
1428518
Left flanking sequence : Till position 1426423 (length
bp)
CGCTCGAGGACTTTTTGAAAGAGCTCCAGACTCTGGGTTACATAAAGGTCAAAGGAAACAAAATTTGGTG
GTAGCTGGAAAAGACTTTTTCTTTTTTAAG
Right flanking sequence : From position 1428518 (length
bp)
AGGGGCGGATTTTTGAGATTTTGTCCTATAAACCCCTATGAAAACTTGAAATATTTAAGCCTTTCGTCAA
AGGGGTGAAAAACAAGCTTTAACAGAACTC
Print the CRISPR sequence : From position
bp To position
bp