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CRISPRs details
NZ_CP006723_2
Flanking alignement tool
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NZ_CP006723_2                                                                                                                 
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Strain :
Leptospira interrogans serovar Linhai 56609 GCF_000941035
RefSeq :
NZ_CP006723 (chromosome circular)
CRISPR id :
NZ_CP006723_2
DR consensus (24 bp) :
TTCCTAAAGAAATCGGAAAACTAC
Number of repetitions :
7
Begin Position :
1439470
End Position :
1439913
1439470
TTCCGAGACAAATCGGAAATCTAC
AAAATTTAACAGAGTTGAATTTAGGGAGCAATTCACTTACGACAG
1439538
1439539
TTCCTAAAGAAATCGGTCGGCTAC
GCAACTTACAAAGTTTGTGGTTGTTTGGAAACTGGCTGGCAACCC
1439607
1439608
TTCCTGAAGAAGTCGGGGAACTTC
ACAATTTAGAAGAGCTAAGTTTAAGCAGGAACCTTCTTATTACAC
1439676
1439677
TTCCAAAAGAAATCAGGCGGCTAC
AAAATTTACAAGTATTGAATCTATCTGACAATCGTCCCACTTTCACCGTTC
1439751
1439752
TTCCAAAAGAAATCGGAGAACTAC
GGAATTTAAAAGAGTTGAATTTAGAGAACAATTCACTTACGACAA
1439820
1439821
TTCCTAAAGAAATCGGAAAACTAC
AAAATTTAAAATGGTTGCGTTTAGGGAGCAATTCACTTACGACGC
1439889
1439890
TTCCAAAAGAAATCGGAAAACTAC
1439913
Left flanking sequence : Till position 1439470 (length
bp)
CAACTTGTGGAAGTAAAAGCTTACACAAATTTAATAGAGGCTTTCCAAAATTCTTCGGATGTTCGTATTC
TGCATTTGAACGGTCAAGGATTTAAAAATC
Right flanking sequence : From position 1439913 (length
bp)
GGAATTTAAAAGAGTTGGATTTGAGTTCGAATTCTCTTTCGGTCAAAGAGAAAAAGAGAATTCGAAAGTT
ACTTCCAAAATGTTCTATCATCTATTTTTG
Print the CRISPR sequence : From position
bp To position
bp