Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP006908_5                                                                                                                 top


Strain : Clostridium botulinum CDC_1436 GCF_000817935 RefSeq :NZ_CP006908 (chromosome circular)
CRISPR id : NZ_CP006908_5
DR consensus (29 bp) : TTGAACATTAACATAAGATGTATTTAAATNumber of repetitions :8
Begin Position : 2217920 End Position : 2218406

2217920TTGAACATTAACATGAGATGTATTTAAATCAATATTCACATTCTCTAATTGTTTTATATTTCCATG2217985
2217986TTGAACAATAACATAGGATGTATTTAAATATTGGCACGTAAGACGAATTCTGTGAAAAATGGGG2218049
2218050TTGAACAATAACATAGGATGTATTTAAATTACCATTACTTATATTTAAAGCTTTAGCTGCCTTTTTG2218116
2218117TTGAAGCTTAACATGAGATGTATTTAAATACGATATCGGCACTGTATTTGATGGCGTAATATCA2218180
2218181TTGAACATTAACATAAGATGTATTTAAATGTATTAGAGCATAGAGCAAATAACCCTTCATGGGCG2218245
2218246TTGAACATTAACATAAGATGTATTTAAATCTTGCATTATTATATTTATATCTGTAATAGTCCAAG2218310
2218311TTGAACAATAACATGAGATGTATTTAAATATTAAATACTCGCTTTTTACCATATCTGTCATGCTAG2218376
2218377TTGAATATTAACATAGGATGTATTTAAGC2218405
Left flanking sequence : Till position 2217920 (length bp)
TATGAAAAATAAGAATCGGTTGGAAAATTTTCTTTTAAACCTTGTAAAATCAATGTGTATATGCTATTCT
TAAAAATAAGGAATGGCTATTTTACTATGG
Right flanking sequence : From position 2218406 (length bp)
GGGAACCCAAATCTCTGATTTGGCGTGAGTCGCTTACTCTTTCATTATTAAGCATAGTATATATAATTAA
GTTTTTTCCAAGTGAATTAAAGATAAAAAC
Print the CRISPR sequence : From position bp To position bp