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CRISPRs details
NZ_CP006909_1
Flanking alignement tool
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NZ_CP006909_1                                                                                                                 
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Strain :
Clostridium botulinum CDC_1436 GCF_000817935
RefSeq :
NZ_CP006909 (plasmid pCBG circula)
CRISPR id :
NZ_CP006909_1
DR consensus (25 bp) :
TTTAAATACATCTAATGTAGAAGTT
Number of repetitions :
11
Begin Position :
153427
End Position :
154089
153427
TTTAAATACATCTAATATAAAAGTT
AAACTTATATTTATGCATTTGTAAAACCTCCGTTCGTTTG
153491
153492
TTTAAATATATCCAATATAGAAGTT
AAATTATGAAAAATCTTATATCTTTTTTTATTTTTTCGGTAG
153558
153559
TTTAAATACATCTAATGTAGAAGTT
AAACTATATTAGGTAGATTATTATACTT
153611
153612
TTTAAATACATCTAATGTAGAAGTT
AAACTTTTCTATTCTGCGCCTCTCTTATAAAAAAGAACCC
153676
153677
TTTAAATACATCTAATGTAAAAGTT
GAACCATTAAATTTATTAAGCGAAGGAGTAGGTATAAATAG
153742
153743
TTTAAATACATCCAATGCAGAAGTT
AAGCTTAAATAAAACTAAAAATTTTTATAAATCGGTAG
153805
153806
TTTAAATATATCTAATATATAAGTT
AAATCCATCTTACTTCATTTTCCATATTTCAAATATGCGTG
153871
153872
TTTAAATACATCTAATGTAGCAGTT
AAACTTAGAAAAATTAAAAAACATGGAGGAAAATAGTAG
153935
153936
TTTAAATACATATAATGTACAAGTT
AAACTACATTTTTATATTTTATAAACATA
153989
153990
TTTAAATACATCTAATGTAGAAGTT
AAGTAGAAGCTAAATTGAAATTTTATAATAAGTTATGATCTGGCATGATA
154064
154065
TTTAAATACATTTCATATAGAAGTT
154089
Left flanking sequence : Till position 153427 (length
bp)
TTGAAAGTAATATATAAAAAAGCAAATAGCTATTAATAGCCATTTGCTTTTTTATATATTATATGTGTAA
ATGAAACGATCTTTTTTCTAAAAACGGTAC
Right flanking sequence : From position 154089 (length
bp)
AAATGTATTATTTTTTTATAAATCTACTATTTCTACTGCAAAAATAAATCCATGTGAATCTCTAACTATA
TGAGTAAAAGATAAATTTTCTTTAATCTCC
Print the CRISPR sequence : From position
bp To position
bp