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CRISPRs details
NZ_CP006943_2
Flanking alignement tool
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NZ_CP006943_2                                                                                                                 
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Strain :
Mannheimia varigena USDA-ARS-USMARC-1296 GCF_000521655
RefSeq :
NZ_CP006943 (chromosome circular)
CRISPR id :
NZ_CP006943_2
DR consensus (32 bp) :
GTTTCAACTCACAGCCACGTGGAGGTGGCTGC
Number of repetitions :
7
Begin Position :
1496013
End Position :
1496444
1496013
ATTTCAACTTATGGCTACGTGAAGGTAACCAC
TTTTTATGTCTTTAACAGATAGAGAAAAAGGGGTT
1496079
1496080
GTTTCAACTCACAGCCACGCGGAGGTGGCTGC
TATTTCTTGGTCTGTTGGCGTTTTAAGTGATGG
1496144
1496145
GTTTCAACTCACAGCCACGCGAACGTGGCTGC
TCTTTGAGTTTAATCAACACTTCATCGTAGCTTTG
1496211
1496212
GTTTCAACTCACAGCCACGTGGAGGTGGCTGC
GCAGCTCCAATTAATGCCACACCTAATACAGCCTG
1496278
1496279
GTTTCAACTCACAGCCACGTGGAGGTGGCTGC
GGAGTTGATGAGTGAAGACTTTGACGAAGTGGAC
1496344
1496345
GTTTCAACTCACAGCCACGTGGAGGTGGCTGC
TCCAGCGAATTACTGCAAAAATTAGGCGTTCAAGCG
1496412
1496413
GTTTCAACTCACAGCCACGTGGAGGTGGCTGC
1496444
Left flanking sequence : Till position 1496013 (length
bp)
TAGTAATAAAGGTGCAGCAATGCACCTTTATTTATATTTCCAATTATCGTGACATGAAAATAGCTACAAA
ATGTCTAAGAAATTATATCTGAATCCCAAG
Right flanking sequence : From position 1496444 (length
bp)
CCCTATATGCAAAAGCATTGTGCTGCAAGGCTTTGTTACCGCCTTTTCGCTAAACGCCTGTATAGGAAGT
ATTTTTAGTATAGCACAATTCAAATTGAGC
Print the CRISPR sequence : From position
bp To position
bp