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CRISPRs details
NZ_CP006953_2
Flanking alignement tool
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NZ_CP006953_2                                                                                                                 
top
Strain :
Mannheimia varigena USDA-ARS-USMARC-1388 GCF_000521685
RefSeq :
NZ_CP006953 (chromosome circular)
CRISPR id :
NZ_CP006953_2
DR consensus (32 bp) :
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
Number of repetitions :
21
Begin Position :
969371
End Position :
970734
969371
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
TAAGACGGAGAAAACCACCAAACAACTTGCCAAAA
969437
969438
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
CAAGCCTGATACTTTGCCTTTTACTAGCTGAACAA
969504
969505
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
AGACCGCAGGTGATTCGCACCGCTCAGCGTGGTTG
969571
969572
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
TTTGCTGTTGGGGATATAGCCACCAAGAGCAGTA
969637
969638
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
GTTGATGCCTGTAATACAACATACCCGTTTTAGGG
969704
969705
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
GCTGGATAGCGTAAAAGAAAAACTAATCCCTGCT
969770
969771
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
GTAGAGTTTGTTATCTGAAATAACTAATAATTGA
969836
969837
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
GATTGCCGAAGGGGATAACTACAAGGCAGTGAAAG
969903
969904
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
AAAGGTTTTATTCTCAATCGACATTGCTTCTGCTT
969970
969971
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
TTAACCCCATTACCTAAAGAGCTAAAAATTTGTGC
970037
970038
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
CAATAGAATGGATTTAATGTGGTAAATATCCCCAT
970104
970105
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
CTCCACCGTGTCTTTGGCAAAATAACGCAAATTTC
970171
970172
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
TGGTGGAATTGTCGGATTATTTTGTGTAGGATTAA
970238
970239
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
TTAGCCTCTTCGCCTTTGGCATTTTTTATCCGCT
970304
970305
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
GCTATCGGTCATCATTGAGCAGCTCGGCTTATCCA
970371
970372
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
ATCAAAAGGTCTTTCGGTATGTACTGTTTTTTCC
970437
970438
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
TCCTACATCGGCATTGATGCAAACGGCGTAGGTT
970503
970504
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
CAGACGTGGCGAAACAAAAATTAATTTGCCCGCAG
970570
970571
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
AATTGCGGTGATTGTGCCTTTTTGTTTATGGATT
970636
970637
GCAGCTACCTTCGTGTAGCTGTGAGTTGAAAC
CCAACGGACAATATCAAAGAGGTATTGGGGCAGG
970702
970703
GCAGCTACCTTCGCGTAGCTGCAACTTAAAAT
970734
Left flanking sequence : Till position 969371 (length
bp)
AATAATTTTGATTCTGTTATACTAGAGCAACTCGTTGTATAAGAGCTTAGCGAAAATGGCACTAATAGGC
CTTGTAGCATAATGATTTCTTATATAGGGA
Right flanking sequence : From position 970734 (length
bp)
TTCCTATTTCTACCCCTTCTAAAATAAAACAAGGATTTTTGTTTTTCTATCCAAAATGGTACACTTCATT
GAAATGAATCATTAAGGATTTTCAAAATGA
Print the CRISPR sequence : From position
bp To position
bp