Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007029_3                                                                                                                 top


Strain : Thioalkalivibrio paradoxus ARh 1 GCF_000227685 RefSeq :NZ_CP007029 (chromosome circular)
CRISPR id : NZ_CP007029_3
DR consensus (28 bp) : GTCCTGTCACCCCATGAGGGGTTAGGAGNumber of repetitions :19
Begin Position : 1095571 End Position : 1096752

1095571GTCCTGTCACCCCATGAGGGGTTAGGAGATTTTCTGTTCGACGATGACGGCCGGTACAGCCGCGAG1095636
1095637GTCCTGTCACCCCATGAGGGGTTAGGAGACGGCGACGGTTCGGTGACTGCGGTTTGTGGGGCC1095699
1095700GTCCTGTCACCCCATGAGGGGTTAGGAGGGCGACGCCTACGGGGTCGGGATGCTGACGCAGCTC1095763
1095764GTCCTGTCACCCCATGAGGGGTTAGGAGTGGGCGAAGACCTGGCCGGCCGGGACCGACGAGGGG1095827
1095828GTCCTGTCACCCCATGAGGGGTTAGGAGGTTGCCCGGCAGTCGCGGCGCTGGGCCGCGTAACTC1095891
1095892GTCCTGTCACCCCATGAGGGGTTAGGAGAGCGCAACGGTATCCTCGAGATCGACGCCGAGCGCC1095955
1095956GTCCTGTCACCCCATGAGGGGTTAGGAGGAAGCGGCGATGCGGGAGCCGGTGGCATGGGCAATC1096019
1096020GTCCTGTCACCCCATGAGGGGTTAGGAGATCATGTGGCGGAGCCACTCGGGGTCCATCGTCTGC1096083
1096084GTCCTGTCACCCCATGAGGGGTTAGGAGACCTCGGTCGGCCGCCAGATCATGCCGTTCTCGACG1096147
1096148GTCCTGTCACCCCATGAGGGGTTAGGAGCTGTTCGAGCGGCACATCATGCGCCGGCGGTTGCTG1096211
1096212GTCCTGTCACCCCATGAGGGGTTAGGAGTGCATGCCGGCGACGGCCGACGCGACGATTTCGGCG1096275
1096276GTCCTGTCACCCCATGAGGGGTTAGGAGACATTCAACGGCCCCGCGTTGCAGCGCGTCGATGTG1096339
1096340GTCCTGTCACCCCATGAGGGGTTAGGAGCGTGCCCGGGGTCCGCCCCGGAAATGACGCCTTCGC1096403
1096404GTCCTGTCACCCCATGAGGAGTTAGGAGGGTTTCGATTCCACTCGGAGGCGGGCGCAATGGGAA1096467
1096468GTCCTGTCATCCCATGAGGGGTTAGGAGGCCTTCTCCCGCTCCTTCACGACCCGCTCCACCTCG1096531
1096532GTCCTGTCACCCCATGAGGGGTTAGGAGGAGTACCTGGAGGCCGCGCAGGCCAAGGGAGACCCC1096595
1096596GTCCTGTCACCCCATGAGGGGTTAGGAGACCGCCGCGTTATTGTTATCCAGCGCCAATTTTGGC1096659
1096660GTCCTGTCACCCCATGAGGGGTTAGGAGGAGACATCGAGCCCCTGAAAGCGGATGTGCTGCTTGC1096724
1096725GTCCTGTCACCCCATGAGGGGTTAGGAG1096752
Left flanking sequence : Till position 1095571 (length bp)
CCGCTGCCCGAGCAGTCCCTGAGGCTGGCTGACTCTCGTTGCTAATCAGGTGAGGGGTTAGGAGTTCGGG
GCCTGCGGCCTGCCCTGCTCGGCGTCATCG
Right flanking sequence : From position 1096752 (length bp)
AGCGCGCCGTCGACGTAGGAAATCTGCATGGTTCCAACGCGTGGTGAATCTGAAGGGTGACCCCTTCCCA
GCCGGCAGTCGTGAGTGTTACCCGCGGCAA
Print the CRISPR sequence : From position bp To position bp