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CRISPRs details
NZ_CP007030_1
Flanking alignement tool
Page manual
  
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NZ_CP007030_1                                                                                                                 
top
Strain :
Thioalkalimicrobium aerophilum AL3 GCF_000227665
RefSeq :
NZ_CP007030 (chromosome circular)
CRISPR id :
NZ_CP007030_1
DR consensus (28 bp) :
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
Number of repetitions :
76
Begin Position :
1357953
End Position :
1362486
1357953
TACTCGAGTAGCCTGTGCGGCAGTGAAC
CCAGCACGGGTGAAACAAAAGTTGTAGCTGAT
1358012
1358013
CTTCTAAGCTGCCTGTGCGGCAGCGAAC
CAGCGGGCGCTCATACCCATGGCTTAAGCATT
1358072
1358073
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TAGGTGATATCAATGAGGCTGTTCACAGAGAT
1358132
1358133
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GAAAGCCACCTACCATAACTGAGCCTGCTGAT
1358192
1358193
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AAATTCGCTATCTCTTGCAGCCGTCCACACAA
1358252
1358253
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
ATTAAACCCCCGTTATGTTGCGCGCGTCCTCT
1358312
1358313
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TTTCATTTTGGCGACGTTAGCGGCCGCCTCCT
1358372
1358373
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GCTAGATGATACGCAGTTTAGGTTTTTTATCA
1358432
1358433
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AAGACTTTTCAGCCAAGGGAGAAGACGTTTTT
1358492
1358493
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TGAGCTTCATCAGATGGATAGCGTTTTTCTGT
1358552
1358553
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TCGGTCAGGTAAGTTAGCCCGTGCCCGAACGT
1358612
1358613
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
CTGGGGGCGGTTGCCTTGCCTCACGTTGACCA
1358672
1358673
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
ATGTGGTGGAAATCGGTTTGAACGGCTTTCAA
1358732
1358733
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AGTGCGTCGGCAGAGCCGGGCCGCATTTTGTT
1358792
1358793
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TTATGAAAGTCACGGTGCAAACCTTGATAGATT
1358853
1358854
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TGTAGCACTTAGCCCAATGACGCGCAGGTTAG
1358913
1358914
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
CTTTTCATCAATCCCTTGGCCGTTTTCGTGCT
1358973
1358974
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
CTTTTCATCAATCCCTTGGCCGTTTTCGTGCT
1359033
1359034
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AATCAGGCGATGGGTTAAACCGTGTGCTAAAA
1359093
1359094
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GATCAACATAGGCGCTCGTATTGTTTTCCACT
1359153
1359154
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TCTCGGCGATCTCTCAAACCACGGCCTAGCAT
1359213
1359214
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AACTAATCACTGGGTAAATTAGCTGGTCGGTT
1359273
1359274
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TTGACTGGTTACAGTTATTGACACGAGTCCAA
1359333
1359334
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GTATTGTAGGATTAAAACGCTATCCGCGTGTA
1359393
1359394
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TTTCACAGCAGATATATTTGACAGAGTAGAGT
1359453
1359454
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
CCGTCCTCCCACTCAAAAAACCCGCCCTTGCT
1359513
1359514
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AGCAAGGCCGAGAAAAAAGCGGGTGAGTATCA
1359573
1359574
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TCCGGCCGAGCCAAAACGCCCAGGCCAGCGAT
1359633
1359634
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
ATTGCGTGGCGTTGCAGTTGCTCATGCTGTTA
1359693
1359694
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
CCCGAACGGGTTTTCAAAATCGCTGGAAAAAT
1359753
1359754
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GGGGCAAAATATCGCGCTCAGTATCTTCAACT
1359813
1359814
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GTATCATGCCGATTCCAAACGTATTGCCGTAT
1359873
1359874
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TTATCTAGTAAAGCTAAACTGTATAACTCTGC
1359933
1359934
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
ACGTAACGCTGTAAACAACACGCCTGAATACAT
1359994
1359995
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TAGCCAATGGATCAGGTGCGGTTAAAGTTGAT
1360054
1360055
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TCTACGACTTTTTCGCCTTTGGAATAATCCGT
1360114
1360115
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TTATCCAGCCGCTTAAAATGCTCAATTAACCA
1360174
1360175
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AGTGAAAGACCAAGATAAGCACCTGTTTATCAA
1360235
1360236
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
ATCTAAAATGAGTTTTTGTGCCTGGGCGACTT
1360295
1360296
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GCTTATGGATTCCTCAAGGTTTTCGACCTTTT
1360355
1360356
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GGCGCGTTATCGTTTGCCGCCCGGCTGCCCTT
1360415
1360416
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GATATACTTGCCCAAACGCTCGGCATCAATAC
1360475
1360476
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GCGTTTTTGAACATTCGCCCTGATTTCTTATT
1360535
1360536
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
CGCCAGCGCCCACATTAACCACGCCAGTGGCA
1360595
1360596
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GCGCAAATCGCTCAAAAATGGATTGACGCACA
1360655
1360656
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GGCCAATCAGTCAGCGGATCGGCTCAAATGAT
1360715
1360716
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
ATCAAACCGATCTATTAACCCAAATCCGTGAC
1360775
1360776
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AAAACCACCGACGCAAGCGGGAATTTGCGCCA
1360835
1360836
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TATCCGGTATCGCGTCCGAGGTTTTGATGGTG
1360895
1360896
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
CTCAAGGGTTTTATTTCAGCGGATTATGACGA
1360955
1360956
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TAAATGCACAGTACCAAGACCCAAGTTTTTTA
1361015
1361016
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
CTTAGTTTCAAGTTTTACGATCTCAATTTTCA
1361075
1361076
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AGATTGCCCTAACCGCTTTAACCTGATCAGCA
1361135
1361136
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GAATTGGGCGAACTGGACGGCACATTCCGCAA
1361195
1361196
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
ATTGCCTCAAACATTTTGAGCGGCTTCAACAT
1361255
1361256
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TAACGCTCAGGCGATGGTGACGCAAGGGGTTCAG
1361317
1361318
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GGGAATTGTACGTTGATGCACGTTTGCAAGAT
1361377
1361378
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
CCTGACCACGGGGAGTACGTTGATAAACTATG
1361437
1361438
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AGGCAGCTAGCCCATTATCAAAGCAGTGGCAC
1361497
1361498
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
CGCAGGACTTGAAGATGGTGAACCAACCACTT
1361557
1361558
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AATATGCCATACGCTAGGCGTATCGAGTACGA
1361617
1361618
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AGCTTTGGCTTTGAGCAAGGCGAAGCCGCGCA
1361677
1361678
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TAACGCGCTTAACTCTGCCAGCGTGTACTCTT
1361737
1361738
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
ATTAAGGCGACGCAGGGCTTATTATTTTAGTT
1361797
1361798
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AGTTGATCGGATTGCCGATGGTCGAATTTGAT
1361857
1361858
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AGTGCCGGCTTTCGCTAATAAGCTAATGCTTTG
1361918
1361919
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GCGTGTCTGTACCCGCATTAATTGCTCGTAAA
1361978
1361979
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
ATTCGCTTTATGACCTAAAATGGAAATCCGAT
1362038
1362039
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GTTAACTGACTATACGATTATAGGCTCTTGGA
1362098
1362099
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
GCATATTATCATTCGCTGGCGGTTTTTCCGCT
1362158
1362159
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AACCGTTGCTTATCTCACGTTGATCAAGATAA
1362218
1362219
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
ATACAGTTCGGCCACCTCTGCCCAAATCTGCT
1362278
1362279
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TTTTGATTTTCCATTGTTTCGGTTTCCTTACT
1362338
1362339
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
TTTACTCACTATAAACACGGCACGCCCTCGGC
1362398
1362399
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
AGTACGGTGAGCGCTCAATCTTTGCGCGCAAT
1362458
1362459
TTTCTGAGCTGCCTGTGCGGCAGCGAAC
1362486
Left flanking sequence : Till position 1357953 (length
bp)
TTAATTTCCTTTTAAGAGCACTATACGTTATTCAAAACCATCTTGCGTATCTAAGATTTTAACAAGACGA
TAAATCTTAAATATATTTTGGAATATCCGA
Right flanking sequence : From position 1362486 (length
bp)
TAGAAACTTTCCAATTAGGAAAGTTTGTTTTCAATAACTTACGCTACTTTTAGCTTTTTTACGCAAAAAA
ACTTTTGCATCGTAAGTATATGTTTTTCCA
Print the CRISPR sequence : From position
bp To position
bp