Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007062_1                                                                                                                 top


Strain : Fusobacterium nucleatum subsp. animalis 7_1 GCF_000158275 RefSeq :NZ_CP007062 (chromosome circular)
CRISPR id : NZ_CP007062_1
DR consensus (30 bp) : ATGAACTAAAAACTTGAAAAGTTTTGAAATNumber of repetitions :21
Begin Position : 175343 End Position : 176728

175343ATTAAGTAAAAAATAGAATTGCTTGGGAAAAACATATAAAAAATACTTGTAATATTGAAAAAAATA175408
175409ATGTATTATAAATTTATAAAGCTTGAAAAAATAGCTATGAACTATAAACTTGAAAAGTTTTGAAATATCTCCACAGGTTTTTTAATGTATTTCTTAATCAT175509
175510ATGAACTATAAACTTGAAAAGTTTTGAAATAAGAAATTAGGATAATTATATTTTCCACCTTTTTT175574
175575ATGAACTATAAACTTGAAAAGTTTTGAAATATTCCACTCCTTACCTATTCTTTTCATATTCTTTTG175640
175641ATGAACTATAAACTTGAAAAGTTTTGAAATCTGGTAAAGATTATGCTTGTATAAATGGAGAACTTAC175707
175708ATGAACTATAAACTTGAAAAGTTTTGAAATTATAGCAGAATGTGTGGAGTTCAATGAAGAAACAAA175773
175774ATGAACTATAAACTTGAAAAGTTTTGAAATATCCTGTATGATAAGACTTACTGCTTCCATATCCTC175839
175840ATGAACTAAAAACTTGAAAAGTTTTGAAATCCACTTGTGCTATTTTCTGATTTACTACTTTGAGTA175905
175906ATGAACTAAAAACTTGAAAAGTTTTGAAATGTTAATACAACAAAAGGAGTATCTGTAAAAGACTCA175971
175972ATGAACTAAAAACTTGAAAAGTTTTGAAATTCTTTATATAGTAAAGAAGATAAAAAAGGAGCAGAA176037
176038ATGAACTAAAAACTTGAAAAGTTTTGAAATATAGGTACTTCAACACTTCCAGCAGCAGATATTATT176103
176104ATGAACTAAAAACTTGAAAAGTTTTGAAATCTCAGAAGCAAGAAAATTAGCTTTTGAAATATAAA176168
176169ATGAACTAAAAACTTGAAAAGTTTTGAAATGCTAACCACTTCTCACCACTTTCTACACTACCTTTT176234
176235ATGAACTAAAAACTTGAAAAGTTTTGAAATTCAGTTAAAGTTCTCCAACTTTTAAAGACTTCTTTA176300
176301ATGAACTAAAAACTTGAAAAGTTTTGAAATGCTAACCACTTCTCACCACTTTCTACACTACCTTTT176366
176367ATGAACTAAAAACTTGAAAAGTTTTGAAATATCTTTGGAATTTCTTTGGATAGAGCTGAGTGGTATT176433
176434ATGAACTAAAAACTTGAAAAGTTTTGAAATTCATAAACTGTTACATATAACAAGCCTTCACTTCC176498
176499ATGAACTATAAACTTGAAAAGTTTTGAAATATTGTTCTAGTATATTTTATATTAATTCTTATATTGC176565
176566ATGAACTAAAAACTTGAAAAGTTTTGAAATGGCTGTGTAGATGATATATTTGTTCTAAAATCTTTAA176632
176633ATGAACTGTAAACTTGAAAAGTTTTGAAATAAAAATAGAATATTTTTAAACTTTCTAAAAATACTC176698
176699ATGAACTATAAACTTAAAAAATTTTGTTGT176728
Left flanking sequence : Till position 175343 (length bp)
ACTCCAAATGGAGAAAATATATTTCTATAATTTAAAAATTTTTCCAAGTAATATTCTAAAAAACTATTTA
AACTTTCCAAAATATGATTATTTTAGAAAA
Right flanking sequence : From position 176728 (length bp)
TAAAAAGTATTTAGAAAAATATTAGGTAGATACAAAACAAAATTAAGGTAAATAATTTATGAATTGGTAA
AAAAATAAAGAAAAACTGGTAAATTGAATG
Print the CRISPR sequence : From position bp To position bp