Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007136_5                                                                                                                 top


Strain : Escherichia coli O145:H28 str. RM12581 GCF_000671295 RefSeq :NZ_CP007136 (chromosome circular)
CRISPR id : NZ_CP007136_5
DR consensus (27 bp) : CGGTTTATCCCCGCTGCCGCGGGGAACNumber of repetitions :4
Begin Position : 3524110 End Position : 3524318

3524110TGGTTTATCCCCACTGGCGCGGGGAACTTGAGCCCTGCCAGAATGGGGCCTCTTTTGTACC3524170
3524171CGGTTTATCCCCGCTGCCGCGGGGAACACATTTACTGATTGTACCAGGTAGGAAAAGATCG3524231
3524232CGGTTTATCCCCGCTGGCGCGGGGAACTCATGATTGTCGATTTTTTCCGACAGGATTTTG3524291
3524292CGGTTTATCCCCGCTGGCGCGGGGAAC3524318
Left flanking sequence : Till position 3524110 (length bp)
CATGGGGAACTATTTTGAACATGAGGGGTTACGTGGATATGTTGCTTATTACGAGTACTGCTAATATAAA
AACTTGAGAAAGAGATAACGGGTTATATGG
Right flanking sequence : From position 3524318 (length bp)
TCTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTACAGTATC
ACACAAACAACACATCCATTATGTTAAAGA
Print the CRISPR sequence : From position bp To position bp