Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007223_1                                                                                                                 top


Strain : Thermosipho sp. 1063 GCF_001941365 RefSeq :NZ_CP007223 (chromosome circular)
CRISPR id : NZ_CP007223_1
DR consensus (30 bp) : GTTTCCATTCCTCATAGGTATGTTCTAAACNumber of repetitions :9
Begin Position : 125563 End Position : 126130

125563CATCCCATTCCTCATAGGTATGTTCTAAACCTTGCATGGAAGAAACGGATGTGCTGCGGTGGGAGCG125629
125630GTTTCCATTCCTCATAGGTATGTTCTAAACGTGATTAAAGCTATTAAAGGAAAGGGTAGTCTTTTATT125697
125698GTTTCCATTCCTCATAGGTATGTTCTAAACCGGCTAAAATCAACGAACACATTGCCAGAAGCAATTTTGG125767
125768GTTTCCATTCCTCATAGGTATGTTCTAAACGAAAATATGGAAAGATATCTAAAAACAAGATTTCATG125834
125835GTTTCCATTCCTCATAGGTATGTTCTAAACGAGATATTATGGAAATCATGGTGAAATATGTAAACTGTT125903
125904GTTTCCATTCCTCATAGGTATGTTCTAAACTAAAATCACTAGATTAATATAACAAGGAGGGGTTCTAA125971
125972GTTTCCATTCCTCATAGGTATGTTCTAAACAATATCAGAAATATTAAAACAATATATGGAAGACG126036
126037GTTTCCATTCCTCATAGGTATGTTCTAAACTTAACATGGAGAAAGAGCGTGAAGATAAGTCAAA126100
126101GTTTCCATTCCTCATAGGTATGTTCTAAAC126130
Left flanking sequence : Till position 125563 (length bp)
ACATAAAATTCCCTCCCAATTAACTCTCCTTTCATTTATAATTACGAATCTAAACAAAAAAATCTGACAA
AATAAAAAATTTTTTCAAATAAAAATTTTA
Right flanking sequence : From position 126130 (length bp)
CAATTAAAAAACCTCATAAATTATTATAAACCAAGATATTTTCATTTTGATTAACTGGAAGTTACCTAAA
AGTAAACATGTTATTTTAAGCCACATACAA
Print the CRISPR sequence : From position bp To position bp