Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007503_3                                                                                                                 top


Strain : Riemerella anatipestifer GCF_001051075 RefSeq :NZ_CP007503 (chromosome circular)
CRISPR id : NZ_CP007503_3
DR consensus (37 bp) : GTTGTGAATACCCTTCAAAGTGAGAGCAGTCCCAACTNumber of repetitions :16
Begin Position : 1685137 End Position : 1686369

1685137GTTGTTAATACCCTTCAAATGCTACGCATTCACGAACTCCGCTGAAACAACAACAAAGCTTGTGAGCTAAACTGAGAGCAGTCCCAACACTCACAACAACTTAAAATACCAAAATAAA1685254
1685255GTTGTGAATACCCTTCAAATGTTATGCATTCACGAACTCTGCTGAAAACGACAACAAAGTTGTGAGCTAAACTGAGAGCAGTCCCAACAATCAGACTTAGCAGATACTCGTGAAAAAA1685372
1685373GTTGTGAGTACCCTTCAAATGTTACGCATTCACGAACTCCGCTGAAAATACAACGAAGCTGTGAGCTAAAATGAGAGCAGTCCCAACTTGGACGAATAATACGCCATTGTTTAACTC1685489
1685490GTTGTGAATACCCTTCAAATGCTATGCATTCACGAACTCCGCTGAAACTACAACAAAGCTGTGAGCTAAAATGAGAGCAGTCCCAACGGAAGGTAGAATTGAATGTTTTCATGATCT1685606
1685607GTTGTGAATACCCTTCAAAGTGAGAGCAGTCCCAACATAGCAGTAGAACCATCAAACGCTGTGGCT1685672
1685673GTTGTGAATACCCTTCAAAGTGAGAGCAGTCCCAACCGGCAACAAAAGAAGGAGAAGAACAAAGCA1685738
1685739GTTGTGAATACCCTTCAAAGTGAGAGCAGTCCCAACAGCAACATATACGAAAATCCAGAAATCTTA1685804
1685805GTTGTGAATACCCTTCAAAGTGAGAGCAGTCCCAACTGTGCTTCCTACAACGAGTAGCGTTCCTTT1685870
1685871GTTGTGAATACCCTTCAAAGTGAGAGCAGTCCCAACTTAACTAAGTTACCTAGAAGTATAAATGAA1685936
1685937GTTGTGAATACCCTTCAAAATGAGAGCAGTCCCAACTCTGCATCTACGAAGGTGATGAGGAAAAGG1686002
1686003GTTGTGAATACCCTTCAAAATGAGAGCAGTCCCAACCAATAGGACCTATTATATTTACAACAACAG1686068
1686069GTTGTGAATACCCTTCAAAATGAGAGCAGTCCCAACATTTTGAAAATATAGAGGCGATAAGCCTTT1686134
1686135GTTGTGAATACCCTTCAAAATGAGAGCAGTCCCAACATTCTAAAAGGTACAGAGAATGAAGCTAAA1686200
1686201GTTGTGAATACCCTTCAAACTGAGAGCAATCCCAACTCAACCAATTTAATCTGCAACTCTGAAATG1686266
1686267GTTGTGAATACCCTTCAAACTGAGAGCAGTCCCAACTGATAGGAATATTTCTTATTCTATTTTTTA1686332
1686333GTTGTGAATACCCTTCAAAATGAGAGCAGTCCCAACT1686369
Left flanking sequence : Till position 1685137 (length bp)
TGTTACGCATTCACGAACTCCGCTGAAAACTTACAACAAAGCTGTGAGCTAAACTGAGAGCAGTCCCAAC
TTTCTGTGTTTTGTGCTGTAGCCTTAATAT
Right flanking sequence : From position 1686369 (length bp)
TAGGAGCAAATAAGCTGTATTTATTGGTGTTGTGAATACCCTTCAAATGCTGTGCATTATTGTTATGATA
GGGTATTGTCTTTTTTGGGTGCTTGTTTTA
Print the CRISPR sequence : From position bp To position bp