Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP008933_1                                                                                                                 top


Strain : Klebsiella pneumoniae GCF_000764615 RefSeq :NZ_CP008933 (plasmid pPMK1-NDM ci)
CRISPR id : NZ_CP008933_1
DR consensus (30 bp) : CCGATAACCCCCGCATGCGGGGGGAATACTNumber of repetitions :9
Begin Position : 10628 End Position : 11144

10628GTCGATACCCCCGCATGCGGGGGGAATACTCATTACGGGTGTCCATTCGGATCTGGTAGTG10688
10689CCGATAACCCCCGCATGCGGGGGGAATACTTTAATCCACTGCCGGAAACAGGAGTCCGGAA10749
10750CCGATAACCCCCGCACACGGGGGAATACCGGCTGTTTCAGCTGATTTTTTTTAAAAGTCA10809
10810CCGATAACCCCCGCAGGCGGGGGGAATACTTTAATCCACTGCCGGAAACAGGAGTCCGGAA10870
10871CCGATAACCCCCGCTCACGGGGGGAATACAGCAGCAGCTGACCAACTGACGGAAATCCAGC10931
10932CCGATAACCCCCGCATGCGGGGGGAATACTACTAACAATATTTAACGAACGCCAACACACA10992
10993CCGATAACCCCCGCATGCGGGGGGAATACTTCCAGCCAGCGGGTAACCGTGGACAACACCA11053
11054CCGATAACCCCCGCACACGGGGGGAATACTATTCAGCCAGTTCTCCTGGGCACCGGGTCGG11114
11115CCGATAACCCCCGCACACGGGGGGAATACT11144
Left flanking sequence : Till position 10628 (length bp)
GAATGTGGGTTATCCTGAAGAAAGTAACTTTCCTTGATTGTAAAAAGTCCCATCTGCTTGTAGGGGCACA
TAACAAAAGCCCCACCATTGCGGTTTTTAT
Right flanking sequence : From position 11144 (length bp)
CTAAAAATAACCGGTTGATTATAAAATATTAAATAGCGCCACTAAAATCCACCAGCTTTTGGAGTTAGCG
GGCAGTGAAATCAAAAGATTGATTTTCATT
Print the CRISPR sequence : From position bp To position bp