Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009439_3                                                                                                                 top


Strain : Streptomyces glaucescens GCF_000761215 RefSeq :NZ_CP009439 (plasmid pSglau1 line)
CRISPR id : NZ_CP009439_3
DR consensus (29 bp) : GGGACCATCCCCGCGGGCGCGGGGAGCAGNumber of repetitions :37
Begin Position : 30090 End Position : 32316

30090CCGACCATGCCCGCGGGCGCGGGGAGCAGCCGAGGACGACGCGCTGCGGGAACGCGGCGT30149
30150TGGGACATCCCCGCGGGCGCGGGGAGCAGTTCGGCCACAACAACCGCGTCGTCGGCTGCCT30210
30211GGGGCCATCCCCCCGGCCGCGGGGAGCAGCGTCGGCTGAACGCGGCTAGGTGCTGGCGGCG30271
30272GGGACCATCCCCGCGGGCGCGGGGAGCAGGTGGATCGACTCGCCGCAGGCCGAGCACTTTG30332
30333GGGACCATCCCCGCGGGCGCGGGGAGCAGTTGGCGACGGCCACGCACGGCTGGAGCTGCCC30393
30394GGGACCATCCCCGCGGGCGCGGGGAGCAGTGCGGCGACGGCGGCCGCGGTCGTGCCGGCTG30454
30455GGGACCATCCCCGCGGGCGCGGGGAGCAGGGCCGAGGATCTTCATTGCTTCTCTGCTTCCT30515
30516GGGACCATCCCCGCGGGCGCGGGGAGCAGTCCATCTGCTCGGCCAGTGCGCGGAGCGGGCT30576
30577GGGACCATCCCCGCGGGCGCGGGGAGCAGCGGCCCGGAAACGCAAGACGGCCCGGCAGGGA30637
30638GGGACCATCCCCGCGGGCGCGGGGAGCAGTGCACCTCTCCGCTCTCGCAGTCCGTGACGCC30698
30699GGGACCATCCCCGCGGGCGCGGGGAGCAGACGCGGATCTGGCACCTGACCTGCGGCCTTCG30759
30760AGGACCATCCCCGCGGGCGCGGGGAGCAGGACGACCAGGAGGCGGCCTCGAGGCTGTAGTC30820
30821GGGACCATCCCCGCGGGCGCGGGGAGCAGCTGATGATGTCGCCCGTGGTGTTGTTCGCCTT30881
30882GGGACCATCCCCGCGGGCGCGGGGAGCAGGTGGGTGGATCGGAGGCTGTCCCCGGGCTGGC30942
30943GGGACCATCCCCGCGGGCGCGGGGAGCAGACCTCTCCCGGCTCGGTCGGTCCCGCCCGTGG31003
31004GGGACCATCCCCGCGGGCGCGGGGAGCAGCCGAGTTCGAGTGCCTTGTTGTGGGGCTGCGG31064
31065GGGACCATCCCCGCGGGCGCGGGGAGCAGACGTGGCCGAGCAGTAGCGGGGCGGGCGCCCC31125
31126GGGACCATCCCCGCGGGCGCGGGGAGCAGACGTTCAATGCATTCCTCAGCCTGCGTTCTGC31186
31187GGGACCATCCCCGCGGGCGCGGGGAGCAGTTGCGACGCGAAGCGGAGCTGTCGCAGGAGGA31247
31248GGGACCATCCCCGCGGGCGCGGGGAGCAGCGGTCACGCATGTCCCACAGCACCGCGTGCCG31308
31309GGGACCATCCCCGCGGGCGCGGGGGGCAGGCTGCGGGGCAGCCCGAGCAGATGAGCGACGC31369
31370GGGACCATCCCCGCGGGCGCGGGGAGCAGGCTGCGGGGCAGCCCGAGCAGATGAGCGACGC31430
31431GGGACCATCCCCGCGGGCGCGGGGAGCAGGTCCGCGCCCGCAGCGTCCCGCCACGACCAACCCCTTCCA31499
31500GGGACCATCCCCGCGGGCGCGGGGAGCAGTTCGCGGACGCGCTGCTCTTCGGCGGCCCGCT31560
31561GGGACCATCCCCGCGGGCGCGGGGAGCAGTCGTCAACCTGCAACCGCGCAGGTCAGCGCGC31621
31622GGGACCATCCCCGCGGGCGCGGGGAGCAGGATCGCTCCGGGTTCGGGCAGGGCTTCGGGGT31682
31683GGGACCATCCCCGCGGGCGCGGGGAGCAGCTGACGATGAGGCCGAGCACCGCGGACAGGGTG31744
31745GGGACCATCCCCGCGGGCGCGGGGAGCAGTGGCGGCCGTCGTCGCCGTCGCCGGTCGGGGG31805
31806GGGACCATCCCCGCGGGCGCGGGGAGCAGAGCCGGTCACGGGAGGTGCGGCCGGCTGTGTC31866
31867GGGACCATCCCCGCGGGCGCGGGGAGCAGGTCAGCGCGTCCGGGGTGTTCCACACCCGCTC31927
31928GGGACCATCCCCGCGGGCGCGGGGAGCAGAAGGTCTTGAGCCGGGGCTCGTCGCTGAGGAT31988
31989GGGACCATCCCCGCGGGCGCGAGGAGTAGCGGCTGTCGGCAATCTCCTTGATCCTCTCCTT32049
32050TGGGCCAACCCCGCAGGCGCGGGGAGCAGCCGCAACCCGCAGGTGAACTGCGGGTTTTAGG32110
32111GGGACCATCCCCGCAGGCGCGGAGAGCGGGCGTGCGCGCGCACGTTGGCGTCAATGACCCC32171
32172GGGGCCATCCCCGCTGGCGCGGGGAACAGCGCATTAACTTCGGCACTGATGGAGAGCCTACC32233
32234GGGACCATCGCCGCGGGAGCAGGCAGCGGTCGCGTACCTCGCGGCGGGTTTCGA32287
32288GGGACCATTCCCGCGTGTGCGAGGAGCAG32316
Left flanking sequence : Till position 30090 (length bp)
CCGAGCCAGACGCGATCATCGGTGCGCTCGTTCCCGTCGTCGACGGACTGTGGCCACCTTCGGCCCGCTG
TGCGAAGTCGTGCTGCACGACTACCGGCAG
Right flanking sequence : From position 32316 (length bp)
CCAGCCAGCCAGTTGGGGGCTCACGTTCACGCGGACCCCCGGGTGCGGGGAGCAGATCAAGGCAGGCACC
GTACGCCGGGCCCATCCCCGCGGATGCCGG
Print the CRISPR sequence : From position bp To position bp