CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_CP009501_3
Flanking alignement tool
Page manual
  
Home Page
NZ_CP009501_3                                                                                                                 
top
Strain :
Methanosarcina thermophila TM-1 GCF_000969885
RefSeq :
NZ_CP009501 (chromosome circular)
CRISPR id :
NZ_CP009501_3
DR consensus (37 bp) :
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
Number of repetitions :
74
Begin Position :
1021519
End Position :
1026905
1021519
ACCCCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AAGCGTACGGTTCACCGGTTGCTTTGGATGGAATAT
1021591
1021592
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TCGAAGACAACAGGAGCCGGGCAGGAGTCTTTAAACG
1021665
1021666
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CCGCCTACCCATGCTAAACGGTTATCCCCACATCCA
1021738
1021739
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GTTTCCCCACCCTGAAAGAGACCTGAGACGAAAGA
1021810
1021811
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GTTTCCCCACCCTGAAAGAGACCTGAGACGAAAGA
1021882
1021883
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
ATGTAGATGGGATTGCCTAACCACTCACTTGTAA
1021953
1021954
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TCGTAAATGCCGAGGATCACGAAACGTTTGTAGAATT
1022027
1022028
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AGAATTCTTCAGTTCATCCCTGATAGGTCTTTCACCCG
1022102
1022103
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GTTCTCACCGGACATGGTCGAGGATGGTATGACTA
1022174
1022175
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CCATTTTGATTTTATTTTTTTCGTTTGATCTAACG
1022246
1022247
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CTTAATTTAATCAGGCTTATAACTGAACTCCCCGACT
1022320
1022321
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TTCAGACAAAAAAGAACGCAACTGTGGAGAAGGTATA
1022394
1022395
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GATATTGTACGCGGGTGCAGTCGATTGTCCTTGAAAG
1022468
1022469
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AAGTATCCGGTACGAACGCTCAGCTGTACATAGGCG
1022541
1022542
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AAGTATTGGATGAGTACGAAGAGATGAAAAAGGAAA
1022614
1022615
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TGGTCTTCCCGCTGTGCCCTCTGCACTCCCAGGAGA
1022687
1022688
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TTCTAACGAGAAACAGGTAAGTTCTTGTCCAAATTG
1022760
1022761
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AAAAGGAACTGCTGGAAGGTTATCTATACGAGCCAT
1022833
1022834
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AATTATGCAAGCGGAGGAACGGTATAGGAACCGCAGCA
1022908
1022909
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
ATGGTTGAAATTACCTTCCCGCTTGGATTCTTCAGTG
1022982
1022983
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GGGCTTGATGTCTTGCCAATGGATACAAAGAAGATAT
1023056
1023057
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AGCAGTCGAAAAGATTTTGAATGTCAGAGAAGAAC
1023128
1023129
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CAATCGACGACAAGATTACCTTTATTTACGGTACTG
1023201
1023202
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GGATCGTCAGATGCTTTTGTGGAAAGAACTGTACGC
1023274
1023275
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GAGCTGGATGTAATTCTCATCCTGGCTGCACTACGAT
1023348
1023349
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AGTTTTATATCAGTTTTGACGATTTCGGGAATATCAA
1023422
1023423
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CAAGATTAAAGTTTTGTAGTAAAGCCCAAAGCCTA
1023494
1023495
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
ATATTAAAACAGTTGACTGCCTACGCAAAAGAACACTG
1023569
1023570
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GAGGTGGAAATGTCGAATGTCGAATTATGATACACA
1023642
1023643
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CCGTCAATTTTTCAGGATCGAATGACCCATTTATA
1023714
1023715
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TCAACCGCTACCGAATTTTCGTTTTTGAATACTTG
1023786
1023787
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TCCGGGGGTTGAAGGTTGGCGGCCTTCAATCTCTACT
1023860
1023861
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CTTTAATCTTGTCTTCTCTGCTCTCTCAATCTCAGT
1023933
1023934
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CCAGTGTATGATAAAATGTACTGTCTGAAAGGGAAAAGCG
1024010
1024011
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TTTTTTTCCCGTTTTCATCGAGAGAATTCCTCATG
1024082
1024083
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CATCAAAAAATACCTCTTGAGTAGTGCCATCTTTA
1024154
1024155
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TGGGATAAATGACGAGGTTGAGATTCAGGCAGCTA
1024226
1024227
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CTAATCAACAAAAAAATTGAGGGAAACAATAATGAA
1024299
1024300
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
ATATTTTATCTAAGAAGGCGAGAAATATTTACCT
1024370
1024371
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TTTATACCAGTTTGCAAAATCCCAGTTTCCAGCTCTG
1024444
1024445
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TAGTCAATCCCCAGGACGTCCAGGACCTCGATGAATT
1024518
1024519
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
ATGGATATTCTTCTGTACGCTGTTCTGCTCGTTTTGG
1024592
1024593
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GTGCTTAAGCTGTCTGGGAGGGTTGGGGCTGAAGATA
1024666
1024667
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GTCGTTCAAGGTTCATCGTGGGGTAGTTGACATAA
1024738
1024739
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TCTTAATGCAGAGATGGAGAATGCTGGAGTTCTGAGTGA
1024814
1024815
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GTTAATGGTTGCAGGTGGAGCTGCAGCAGGAGCAG
1024886
1024887
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GTATAACGAGGTAATCAGGGAAAGGCTAAAACAAA
1024958
1024959
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CTGTCCCATACACATCTGAAAATTTCGTACCATTTGC
1025032
1025033
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CTGTCAATAGCTCGGCATACGGTCCTTTCGGCAAA
1025104
1025105
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AAATAGTACCCCAATCAATAGTCTTTTTATTGACCA
1025177
1025178
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TGGTATGTCGTCATGTTCTGTCCTCAATGTCTATAGA
1025251
1025252
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GATGGGGAAAGCTGCTCGGTCGCTGGACTTGTGGAGCA
1025326
1025327
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GGGATGAAGAAACCACGCTCTTCGTAGATTTTCCGG
1025399
1025400
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AATTAACTCGGATAATTTAGTTCTGAAGGGCAAAAC
1025472
1025473
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CTTTATTTGTACGGGGTGTACGGGGTATTTTTGAAAAA
1025547
1025548
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GCCGAGAACCGAGGAATAGACCTCTGTGTAATAAACAT
1025622
1025623
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TGATGATTTGGATTTATAACAGGATATTTTGAGGGA
1025695
1025696
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AGGCGTTGTAGATGTTTAACAGGGTCGAATAAGTA
1025767
1025768
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TGAGAGGCTACAGGAGTTATCCTTCGAGGGAGTAAAAA
1025842
1025843
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AGACTAGGATGTCAGCTGAGATATTCATCCGAGCCG
1025915
1025916
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TCTTAGGTTGTACAATATACTATACAACCTATTACTATA
1025991
1025992
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TTGAATCATTGGTGAGTTTTCAAACGGCTACCTTT
1026063
1026064
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
GTCACAGAGCGCATGATATGCCACATACGTAATCTA
1026136
1026137
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
CGGATATTATATGTGTGGATACAATCAGAAGGAATA
1026209
1026210
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TAGGGATATCACACGTTCATTTCGCGTGAGGCCGTCG
1026283
1026284
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TCCTCGCACTCATCCGACTCTGGAAAATATCCGCAA
1026356
1026357
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
ATCACGGAAAAAGGCAGCACAGCCGAGCGTGAAGCCA
1026430
1026431
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
ATGTTTGCAACGGCATAATCTCCCGAAGGCGAATATG
1026504
1026505
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TTAAAAATTTAGTAAGTGAACCTTCAATAGACTCCTC
1026578
1026579
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AAAAAGAACTAATTCGGAGGAAAAGAAAATGATAT
1026650
1026651
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
AGTATATCCTGTTTTTCAAAGTATGGTCATGCAGG
1026722
1026723
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TGTAAAAAAATATAAACACCTATAATAATATAGGAAA
1026796
1026797
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
TCGGTTAGAATTTGCACTTAAACCGGGGTGAAGAG
1026868
1026869
GTTTCAATCCTTGTTTTAGTGGATCTTGCATTCGAAT
1026905
Left flanking sequence : Till position 1021519 (length
bp)
TATAAAAATATTAGCAGATGTTAAGTTTGATAGTACAATTCATGGAACTGTTTTGCTGCGAATTTGGATA
AGTACAGACTAAAAACTCCTGCACAAAATT
Right flanking sequence : From position 1026905 (length
bp)
AGGGGAAAATTTTCTTTTATTTGGCTAGAAAAAGCCTGAAATTGGTCCTATATTAAAACTAAATTTCTTG
TTGGGATATTATCAAACCCTTTATAAATAC
Print the CRISPR sequence : From position
bp To position
bp