CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_CP009501_8
Flanking alignement tool
Page manual
  
Home Page
NZ_CP009501_8                                                                                                                 
top
Strain :
Methanosarcina thermophila TM-1 GCF_000969885
RefSeq :
NZ_CP009501 (chromosome circular)
CRISPR id :
NZ_CP009501_8
DR consensus (37 bp) :
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
Number of repetitions :
31
Begin Position :
2418131
End Position :
2420381
2418131
GCTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
ATCAAACTGCCAGCACTCGTCTATTTATTTTTCATGCG
2418205
2418206
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
ATATTCCCAGGCGAGACCACCAAAGACGATTACAAGAA
2418280
2418281
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CAGAAGGTGCTCTCGTTACAGCAATGACGTTTATTTC
2418354
2418355
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
AAACTGGCCTTCTTACGGAGATTGGCGGCGGACATG
2418427
2418428
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
AGAAATGTAAACCTGTACAACTCAATGTTTGACTATG
2418501
2418502
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
AGCCAAAAAAGATGAGTTTTAAAATCGGTCAAACAG
2418574
2418575
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CGTATAATGATGCTACTGTTCTCGCTTCACAAATGA
2418647
2418648
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
ACAGACTTCCACACCGAGATGGTTATTTATTCGGT
2418719
2418720
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CCCTTGAGATCGTTATCAGTCTAATTTCTTAATAT
2418791
2418792
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CTGAATGGGCGTGTGTACTCGGCTGGGGTCCTGAGGAT
2418866
2418867
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
GTATCGGTAGAATTCAGGAACGGACACTTTCACACAG
2418940
2418941
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CCTTAAACGGGTCTATATCTGCAACGACAACGAAGCAAA
2419016
2419017
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
AAATCCTTTTCGCTATCGGTAGAAGTGTAACCATGTG
2419090
2419091
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CAGAAGATTTTAAGACACTTACCGCAGCCGATCTTAAC
2419165
2419166
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
TCAGAGAACCTAACCGTTAATTAGGCATCCCTAATATT
2419240
2419241
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
ACCATAATATAACATCTCTCAATTTACTTGCTGAATA
2419314
2419315
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
TTATTCTTCTTTGTAGTATCATCTAGAAGCCGTTTA
2419387
2419388
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
TTCTCAAACTTTTGTGCGACTTCTTCAGGGAGCTC
2419459
2419460
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
TGATATGAAGAATTCGGCGGATGAGACTTACCAGGCAG
2419534
2419535
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CACCAGACAGCTTGGACGGATTAATCTTAAAATTAGGA
2419609
2419610
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
GGCAGGATAACGGTATCATTTTCGGCGACTTGAGTA
2419682
2419683
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CCTGCCCCGCTTCGCAGCTTCTTCCAGGCAGAGATGATA
2419758
2419759
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
AAAACTGATAATTGTAGATACATTAAGTTGAAAGGTA
2419832
2419833
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CAGTGAGAGGCATTTATTCAGCCTCCATAACAGCCT
2419905
2419906
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CCTGTACTGCTGCCTGATGTGCATCATGGATGATCTG
2419979
2419980
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
ATCAACGAAAGAGTACGAATATTCAGGAACTTTCA
2420051
2420052
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CTTGCAAAACAAACGTGATGCTCTGGAATTAATGAC
2420124
2420125
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
GTCAATCCAAACCGTGAAAAAAGAGCTTCGAGAACT
2420197
2420198
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
CTTTTTTTCACGGTTCACCTCCTGTGTAAAGTGTTA
2420270
2420271
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
ACTAAAACTGATTATATCACGGTAGCTGCAAAATCGG
2420344
2420345
GTTTCAATCCTTGTTTTAATGGATCTTGCATTCGAAT
2420381
Left flanking sequence : Till position 2418131 (length
bp)
AATTCTATTTCATTCGACAATTAATATATAGTATCTGACAGATCTGATAGGTTTGTTCACGAATATGATA
TCTCCATGCAAAAACATTACGAAGTAAAAT
Right flanking sequence : From position 2420381 (length
bp)
AGGGGAAATTTTTCCTCTATTTGGCTAGAAAAAGCCTGAGATTACTACTATATTAAAACTAAATTTCTTG
TTGGGATATTATCAAACCCTTTATAAATAC
Print the CRISPR sequence : From position
bp To position
bp