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CRISPRs details
NZ_CP009505_16
Flanking alignement tool
Page manual
  
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NZ_CP009505_16                                                                                                                 
top
Strain :
Methanosarcina sp. MTP4 GCF_000970045
RefSeq :
NZ_CP009505 (chromosome circular)
CRISPR id :
NZ_CP009505_16
DR consensus (37 bp) :
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
Number of repetitions :
76
Begin Position :
2794713
End Position :
2800216
2794713
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TACATTATTTGTGGATATTTGTATCCAACTTTCACCA
2794786
2794787
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
AATTCGACGATATTCATGTTGCTGCGTAAAATAAAA
2794859
2794860
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
AAAGTGTAAAAGATCAAAAAAAAATATATGATTA
2794930
2794931
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
CGAAATACGCGACCCTGACCACGGCCAAGTTGACCA
2795003
2795004
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATTTTGTGCTAGTGATGGTCGGGGCGGTGAAGGGGG
2795076
2795077
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
GTGAACTCGCCATGCTCAACGCAATTGCTCAGGGTA
2795149
2795150
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
CCGAAAACGCAAAACTATAAATATTGAAATCTGT
2795220
2795221
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TGATTCTTACTGGTTAAATGCTTCTTTACACCCTGA
2795293
2795294
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTACCGTGTACCCTGCCGCCGTAGCCTGGGATGTT
2795365
2795366
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
AAATGGGTACGTTACTGACCGACATTAAGACACTG
2795437
2795438
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
AGGAATGGATAGAAGAACTCAAAGCCGATTCTGAGG
2795510
2795511
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATATAAACCCAACTACCCTAGGGTATGTAATTTCAA
2795583
2795584
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TGTCTGAGAATTAAATCCCCTGTCCCGACAGTGTAA
2795656
2795657
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTGGAAAATGACTGATTGACGCAATCAAACAGGTCCC
2795730
2795731
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATTTCGACTGCGCCCCCGTAGAGGGTTGCGTCGATG
2795803
2795804
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TGTGTTATCCATGAGCTGACGGCCAACTATTACAA
2795875
2795876
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
AAAATCCTGCAGTTTCTGGGAAATTGCAGGCAGC
2795946
2795947
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
CTCTTTCATTGTGGGCTGTGTAAATTTGAGCCCGC
2796018
2796019
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ACAGTTACAAACTTCTGTATTAGTTCTTTGTCCATC
2796091
2796092
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATGACGTTCCCAGTGATTGATATATTTTCCAATGTG
2796164
2796165
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
CAGTACCAATTATTTCTAAAATATTACAATTGTTTT
2796237
2796238
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TATATAGCACTATCTTTTACATAGCCAAAGCTATACATT
2796313
2796314
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATAATTATCTAACAAATCTTAAAATAGCTTTGGCCGA
2796387
2796388
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TACACCTCATCCACAGAAAAACCGGTCCATTCAACAAG
2796462
2796463
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
CCATCAGAGATAAAGCTCTGATAGCTTTTTTATA
2796533
2796534
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTTAAGCGGATTCTCCAAAAAATCAAAGACGAATGG
2796606
2796607
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
GAAAAATATTGGGACACCCTACGTAACCTGGGATATG
2796680
2796681
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TACCCGCCCTCAAATGTTTCTGAGATGATCCCGGTGT
2796754
2796755
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATACTCCTTCTCCCTTCTCCGGCTTTGTGTTCAGTC
2796827
2796828
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTGAATGGGTTAGTTATAGGGCGTTCACCGTACATA
2796900
2796901
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ACCATTGTTTCGCAACCTGCCCGGAGTGGTAAAACT
2796973
2796974
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTGTATTGTAGGTAAATGTACCTACGGAGGATCTAC
2797046
2797047
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
AGTGTTGCTATACATTTTGGGAATGTATTGATTT
2797117
2797118
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
AAATCTGATGTTGGGGGAGATGTGACCTGTTCTGAG
2797190
2797191
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATTTTTAAGAGGTCCAAACCATGCCAAAAGTATCT
2797262
2797263
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TGTTTACTATTTGTGTTCTTACTTTCCCTCCAAAATTC
2797337
2797338
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATAAGTCCACGATGAAAAAACGGGCTTGAAGGGATTT
2797411
2797412
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
AAAAAGTATAAGGTATGATGTATCTACGAGATTGCA
2797484
2797485
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATCTATTATCCCGAATTAAAAACTGTGCAGAAGC
2797555
2797556
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TAAGTGCGGCCTTTGTAGCCAGTAAAGCCCCTGCAAA
2797629
2797630
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TCCCCGAGTGCCCCGCCCAGAGGTTCCAGGAATTCAA
2797703
2797704
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTGAAGCCGGTATAGGATGGGCTGAAGAAAATAAC
2797775
2797776
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
GTATTTGGAGACATAACAGCCCGTAATACAGGCAT
2797847
2797848
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
CGTAAACGGTGCATCAGGCTACACTCTTGAATGCG
2797919
2797920
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTTTGTACCATCTGGTACTCGGTCATGAGCCCCAT
2797991
2797992
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TATGGATACTCCTTTCTTGAAACTTGCGGCGGGGA
2798063
2798064
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATCATATTCATGATTTTCTATTACACACATCCTTAA
2798136
2798137
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTCATACAGTCACCCCAAACCAACCAAGAATTTTTA
2798209
2798210
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTGAGATAAAAGACTCTACTCAATTTGAAAACCGGCCA
2798284
2798285
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATGGGAGTTGAAGCTGTTGCCGATGCCATGACCGG
2798356
2798357
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ACAATTTTGAAAAATTGCTTGTAATCCATATAAAAA
2798429
2798430
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TCCGGATTGTTAAGTGTTTTTGTGATTTCTTGTTTT
2798502
2798503
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTCTGTTGTTCAATAGAATGGTAAGAAATTAAAT
2798573
2798574
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTCTGTTGTTCAATAGAATGGTAAGAAATTAAAT
2798644
2798645
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
GTAACCGAGTTTGAATTGTTGGTCAGGAAATCATAA
2798717
2798718
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TAATACCAACCGGTCGCACCTGGCATGTTAGGGAAGT
2798791
2798792
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
CACAACAGCAATAATAAAATGAGTACCCGGAAACAA
2798864
2798865
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
CACAACACATTATACATCATGGCAATAGTCATACAC
2798937
2798938
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
CACAACACATTATACATCATGGCAATAGTCATACAC
2799010
2799011
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ACATTCTCGATGTCCAACTGTTCCGCCATTCTCCA
2799082
2799083
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ACCGTTGTCGCTCCTAACGGCTCCACACAATCAACA
2799155
2799156
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TGTCACTGTGTCGATCTGCAGGACTCCGTTTTTTCCT
2799229
2799230
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
AATAGAGAATTTTTTGATCTGGCGCAAAGTTCTGAA
2799302
2799303
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TATAAAAGATATGAAAAATGCGGAGATGGCAGAAAG
2799375
2799376
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
ATTGGTCTTCGGTCAAGGCTTGCTTTTTGAGAGCAGG
2799449
2799450
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTCCCTGGGGATTATTATATCTGGATCTCGTGATCC
2799522
2799523
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
GATACTGTATACATAGCATGTGAGGGAACTTCTAATAA
2799597
2799598
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TAATCCAGCAATCGCCCTCAAAAATATGATCAGTAT
2799670
2799671
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TAAGTATCAGCGTAAAGATCTGATATAGATTCTA
2799741
2799742
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
AATTTGCATATAAACAATATAATCATTATTTCGTTT
2799814
2799815
GTCCGTGAGCAAAATCCACTAAAAAAAGGATTGAAAC
AAAAAGCGTCCATGTCATCCACCCCTTAAAATTA
2799885
2799886
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
CACTGAACTAAATCAGCTATCGGAAGATCAATTAAAAG
2799960
2799961
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TTGATAAGCTCCTCAATAAAGTCTCGGTAATCCTCA
2800033
2800034
GTCCGTGAGCAAAATCCACTAAAACAAGGATTGAAAC
TAAGATTAAATCTTCATCTTCAGGTGCTAAAAAAG
2800105
2800106
GTCCGTGAGCAAAATCCACTAAAAAAAGGATTGAAAC
TGAATGATATCCTAGAGATAGACGTAGACGGACGAAA
2800179
2800180
GTCCGCGAGCAAAATCAACTAAAAAGGGGATAAAAAA
2800216
Left flanking sequence : Till position 2794713 (length
bp)
CCTATATAAAGGACTTGATAAATTACCATCAAGAATTTTGATGCCAAAAAAGAAGCTTTAATATACCTTA
TTTACCTAAAAAGAGGTAAAAACTTGCGGT
Right flanking sequence : From position 2800216 (length
bp)
CCTATACTCTCATTTCAATTTTTTAGGGAAAAGCCGTCCGCCTCGCTTCGCTCCGCGGCCGGTGAGAGCG
CCGGCACCCAAAAAAGCAATCCGAAAAAAA
Print the CRISPR sequence : From position
bp To position
bp