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CRISPRs details
NZ_CP009506_3
Flanking alignement tool
Page manual
  
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NZ_CP009506_3                                                                                                                 
top
Strain :
Methanosarcina siciliae T4/M GCF_000970085
RefSeq :
NZ_CP009506 (chromosome circular)
CRISPR id :
NZ_CP009506_3
DR consensus (37 bp) :
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
Number of repetitions :
19
Begin Position :
2324447
End Position :
2325822
2324447
GTTTTAATCCTTGTTTTGGTGGCTGTTGCTGTTTTAG
CTTGACATACTTTCTCTAGAGGAAAAGTTGAGAGTAT
2324520
2324521
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TACTGTCCATACTTCCTTTTATTAAAGAAATAAATAA
2324594
2324595
GTTTCAATCCTTGTTTTAGTGGTTGTTGCTGTTTTAG
TCCGGAAAACGTAACATTGGTCGAAGACGACCAAAATA
2324669
2324670
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TGTCGGAAGCCGTATCCAGGTTCCCTGGAAATGAAGCAG
2324745
2324746
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TGGTAAGCCTCAGCTTGACACGGGAAGAATTTTGAA
2324818
2324819
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
CTGTCCAGCATGTAAGGGTTCAGGATCAATCAGGCAAT
2324893
2324894
GTTTCAATCCTTGTTTTAGTGGCTGTTACCGTTTTTC
CTGGAAGTAGGAATAGGATTGTATCGTAATACAAAGG
2324967
2324968
GTTTCAATCCTTGTTTTAGTGGCTGTTACCGTTTTTC
ATGGAGATGAATTAATGAAAGATGCAGTCAATTTTAT
2325041
2325042
GTTTCAATCCTTGTTTTAGTGGCTGTTACCGTTTTTC
TCTGTCTTATAGGTATAATGGATATTTTAGAACATAGTC
2325117
2325118
GTTTCAATCCTTGTTTTAGTGGCTGTTACCGTTTTTC
AAAAGGAGAGGAGAGGCAAAATGATTATAGATTATTG
2325191
2325192
GTTTCAATCCTTGTTTTAGTGGCTGTTACCGTTTTTC
AATATAAAAGGAGTGAAAGAATGTCAGGGGAAGAATTTGTG
2325269
2325270
GTTTCAATCCTTGTTTTAGTGGCTGTTACCGTTTTTC
CAGAATGAAATTGTTGCTTGCCGTGTTTCTTATCA
2325341
2325342
GTTTCAATCCTTGTTTTAGTGGCTGTTACCGTTTTTC
AAAAAATACATAGAGATCAGGTTAGAGAAAGAGAAT
2325414
2325415
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
AAGGATACAATAGAGGTAGCCTTGAGTTTTATAGAA
2325487
2325488
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
ATAATGTTGGATAACATACAAACCTGCAAGATTGAAGAGA
2325564
2325565
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
CGGAACATTCCACATTCCTGCCCCGTGGTTCAATGG
2325637
2325638
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
CGTGAATCCGAAATCGTATTTGAAGAACAAATGCGAAG
2325712
2325713
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
ATGTCAAAGCTTATTTCTTCCCAAGAAGAAATGATC
2325785
2325786
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
2325822
Left flanking sequence : Till position 2324447 (length
bp)
AATCCCTAACAGCAAGCAGTACCCGATATTCTCCAACTTTCAAAGAATAAACTGGAGTGTTAGCAGGAGT
TTTAAGCTTCCTGGAAAAATCAAACCCGCA
Right flanking sequence : From position 2325822 (length
bp)
AGGGTCGTTTTCCCTTATTTTCAGCAAATTATTAAGTAATCTCAAATCTTAAAACCAGTATCAAACAGCT
TATTTTTTACTTTAACTGTCTAATCTTTGG
Print the CRISPR sequence : From position
bp To position
bp