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CRISPRs details
NZ_CP009508_6
Flanking alignement tool
Page manual
  
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NZ_CP009508_6                                                                                                                 
top
Strain :
Methanosarcina siciliae C2J GCF_000970145
RefSeq :
NZ_CP009508 (chromosome circular)
CRISPR id :
NZ_CP009508_6
DR consensus (37 bp) :
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
Number of repetitions :
21
Begin Position :
2768489
End Position :
2769988
2768489
GATTCAATTCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TGGTAAGAGCATTATTGTTCTTGAAGAAGATGAAAAG
2768562
2768563
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TCCGAAATACAGAGTCCGCCAATCGTACCAGGAAGTAA
2768637
2768638
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
CTGCTTTTTTTTTCTATTCTCTTTTATATTTTTT
2768708
2768709
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
GACACTGGTAAAGGAATATTAACCTGTTTCCCTTTTG
2768782
2768783
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
AGGAGAACAAGAAATGAGAAACATCAACAAAAATTGGA
2768857
2768858
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
AGGATTACGAAAGAGGGCCGCTCCTTGAATTACA
2768928
2768929
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TATAAAAATGAATTTTCCCTGTAGCAGATCTATGTG
2769001
2769002
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
GACTACAAGGATGAATATACTATGGTAGATGAAGAG
2769074
2769075
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
ACATCATCCGTTTCCTACTACCTTGAACGAAGTTGTA
2769148
2769149
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
AGAAAACGCCATATTTCTGCTAGAAAATACTATTTT
2769221
2769222
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TTACCGTTGCTTTATCCGATTTTAGCCTCTTCATGGT
2769295
2769296
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
GAATGTACGTTGAAAGAAGGAGAAATGAACATAGA
2769367
2769368
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TTTCGGTGATGCTTGTATTGTTGGCAATCAGTTTAA
2769440
2769441
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
AAAATAGCAGAGATAAACCAGGCCTGTTAACAGAA
2769512
2769513
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
GGAGGAATGACAATGAATGTCGTGAAATCAATATTATT
2769587
2769588
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
ATATTGTACTTGGCAGTCTCCTGAATCTGATCAAA
2769659
2769660
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
ATAAAAGATTGTGTACTGCAAAGACGATATTGTAGA
2769732
2769733
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
ATGTGGAGCATATCCAGAGCTAAAAACAACTAAAAA
2769805
2769806
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
AAGAGGTTGAAATTCCTTATTCTTTAGAACAGATTGAA
2769880
2769881
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TTTCTAATTGTTTCTTTTATGGTAGCGGTATTTC
2769951
2769952
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
2769988
Left flanking sequence : Till position 2768489 (length
bp)
CGAAGAATTCGGGGTTTTTCCGAATTAAAGCACTCGATACTTTTTCGTGAACTACTTCTCAATAAAAATA
GGCTTTTGAAATATACAAAAACGAAAGAAG
Right flanking sequence : From position 2769988 (length
bp)
AGGGTCGTTTTCCCTTATTTACAGCAAATTATTAAATAATTCCAAATCTAAAAAACAATAGCAAGCAAAT
TATTTTTTGCTTAAACTGTATAATATTTAA
Print the CRISPR sequence : From position
bp To position
bp