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CRISPRs details
NZ_CP009514_12
Flanking alignement tool
Page manual
  
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NZ_CP009514_12                                                                                                                 
top
Strain :
Methanosarcina mazei C16 GCF_000970245
RefSeq :
NZ_CP009514 (chromosome circular)
CRISPR id :
NZ_CP009514_12
DR consensus (37 bp) :
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
Number of repetitions :
78
Begin Position :
3314776
End Position :
3320410
3314776
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGCTATAACTTTTTCAGGGAAATCCTTTGGAAAAG
3314847
3314848
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTATTTTACGGGTTCCACATGAACATGGATAGTAC
3314919
3314920
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCAAAATTTGTAAACAGCGTTAACATAATATTCAA
3314991
3314992
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGCAAGGGCTTAAAGGTGATCTTGTATGGTAGG
3315062
3315063
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCGCATATGGCTCTCTAAGATACAAGCATATTCCT
3315134
3315135
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CTATCATGCTGACACACCAAGAGCCCCGCAAACCGC
3315207
3315208
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGCAGTGTCGTTATTTCTGTACCTACATAAATGGA
3315279
3315280
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACAGACCCATCTGGGCGAATAGAATCAACCTTGAATC
3315353
3315354
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TATTGATGGTGTGGCGTATATCCCAGGGGTAGACGCT
3315427
3315428
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGCACACATTTTCAAAGACACCATGAATCAAGTGAC
3315500
3315501
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAATAATGCCCTAAAAGTATATATACTTTTAAGG
3315571
3315572
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAATGACCTTGATGATTTTGAACAGGCAGCGATCTT
3315644
3315645
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAATCTCCTTACACTTCCAACCATCACCAGGGACGG
3315717
3315718
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GCTTTAGCTGTAACATGGATTCCAGGTGTTTCTGAATT
3315792
3315793
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GACAGGTCTTTGACTTCGTGTTTCATATTAGCATC
3315864
3315865
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACAAGAGTATTCCACCGAGGATAACCCCAAGATCTG
3315937
3315938
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCAGGTACGTAGTCCGTGAATTCCTTAGCTTCAT
3316008
3316009
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAAGCTGCAGGTTATCCCCAGAGACTTCTATCAAG
3316080
3316081
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTATTTCTGAAGTTCTAAGCTGGAACCACTGGAA
3316152
3316153
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCATCCCGTTTTTCAAACTCCCTGCCGGATTCGAACC
3316226
3316227
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACCTTAATCTTCCAGTTGATGATGATGTTCTTAT
3316297
3316298
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACTATCTCAGAAACCACAGAATTCAGCACAATTTCAC
3316371
3316372
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATAGAACGCGCACAGGAGGCTGAAAAACGTGGAA
3316442
3316443
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTAGTTTTACAGTGTGGCCGTTGAATGTGATTGTTT
3316515
3316516
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCTGAGACTCATTATAAAACCCAAATGCGAATTTT
3316587
3316588
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CTCAAATCCATTATATTGTGATTTACGAGATAT
3316657
3316658
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAAATTCATCTTATTTTCCTTCTTTGTGTAGTAAGTA
3316731
3316732
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CTCACCCAGTTCTTCAACTACTCCGGAACTTGATA
3316803
3316804
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTGCAACAACTGATGCGTATGAAGAAGGTTATAAAGA
3316877
3316878
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACATGAATATCCTGAGTCATAAATCCAATTTTTTC
3316949
3316950
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAACTCTAGCGTTTGCGCCTGGGTAGTTTCTGTTAG
3317022
3317023
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATGCTAAAATTGATGACGACAGAACTTATACTCAAA
3317095
3317096
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CTTTTACACCGTTCAGCCAGTGGTCTTCTACAGGG
3317167
3317168
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGGTGTGGGGGTATTGGTAAGTGCCTCCTAAAAAAA
3317240
3317241
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGTTCCATGGGCAATATTTCTAATCCGGTTTCTTCC
3317313
3317314
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACTCATTCGCTTTCTGTTCAAAAAACTCTTTCTTT
3317385
3317386
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGAGAAAGATTCTCGTTCATAGTCCAGAAGTG
3317455
3317456
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CGCAGAGCATATAGACCGTTACGGCGTGAATTTGGA
3317528
3317529
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTACAGGATCCTAAAATCGACTCTGCTGATACCGGTT
3317602
3317603
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTTTTCCAATTGGAGATTCTACGCTTTTCCTTTTTT
3317676
3317677
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTACCCAATGAAAAAATAGTCCATATCGGATTTAGAC
3317750
3317751
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGTACATCATCGACAATAGAAACTATAAAGCCAGC
3317822
3317823
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCATGTTTCTAAGCCCGCATTTTTCGCATAGAAC
3317893
3317894
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAAAACAGGTGCAGCCGTTAAACGTGCTTTCAAAGAG
3317967
3317968
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCAATGGGCAATAATCCGGCCAGCAAGGCTCAGATA
3318040
3318041
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTTCGGTTCAAAGTGCAACCCGGACGAAGAAGA
3318111
3318112
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TATATCAATCTCAAAGTGACCTTTGTTTCCTGTGGA
3318184
3318185
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TATATGTTGACTGCGTATACTTACTTGCTAAGATG
3318256
3318257
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTGGATTGGCTTAATTCCCTTCTCTGCATGAAGAAG
3318330
3318331
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGTAAGAAGAGAGGCTTGAAAGAAGTTGAGTA
3318400
3318401
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAAACTGTCTGGTTAACAATGTCTATATAAGAATT
3318472
3318473
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTTGCCCTCTTGACTCAGAAGGAAGCAAAAGAACA
3318544
3318545
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TATTAAAAAATAGTATAAATAGTAAGTCGGTTGAAGT
3318618
3318619
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAAACTGTCTGGTTAACAATGTCTATATAAGAATT
3318690
3318691
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTTGCCCTCTTGACTCAGAAGGAAGCAAAAGAACA
3318762
3318763
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TATTAAAAAATAGTATAAATAGTAAGTCGGTTGAAGT
3318836
3318837
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTAAAAAATTTCTTCTCCTTTGCAGCGTACCATTTC
3318909
3318910
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACCTGTTTCATTTATAAGCCTCTCTGTCTTTTAATTT
3318983
3318984
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGAAGGAAAACATCCGTGAGCCTGTACGGATACCCTT
3319057
3319058
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCCATTCGTGGCCCACCCCTCCAGGGTTTGAAGCT
3319129
3319130
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAAAAAAACTTGATGAGATTATTAACCCCAGCCCAGCA
3319204
3319205
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGTCCTTGGTTTGGATTGTGAAGCCTTGAAGTAA
3319276
3319277
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATGAAAATCTAAACGATGAATCTAATACACTTCC
3319347
3319348
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAAGAAAGTATGACGGCACAGCAGGTATAATTAAC
3319419
3319420
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTTATCTCCTTTTAATTAGCGTTGTTATCATTCGTTTT
3319494
3319495
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTTATATATTAATGGAATAAATGAGTCGAGTGGTAC
3319568
3319569
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCGTTATCGATTATACTGACCGTGATAATTTACG
3319639
3319640
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCCCTGCATTTCTGATCGTATTTTGTAAAAGAATAGA
3319713
3319714
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTACACTTAGCATGTCCTCTAAACTCGCTTTTTCCGTT
3319788
3319789
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
CACGGTAACGTTTTTTTATGTCAAAAAAATAATCCGGAT
3319864
3319865
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
CTTGGTTACTTTGTGGACCTGGGCGAATCCACAG
3319935
3319936
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
AATCTGCTATATTATCCAGTATTACTCCATTAATTACT
3320010
3320011
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
TAACTCTGAGCATAAGAAAGAATTTCGTGATCTG
3320081
3320082
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTACAACGTCTGCAAGCTCTTCTTTCATGTGTTCGT
3320154
3320155
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTCTATGAACGAGATTCCTGTTACTCTTTTTGAGA
3320226
3320227
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTTCGAAGAGCGTTTCTTACTTCTTCTGCTTCTTCT
3320299
3320300
GTCGAGAAGTAACTTCCACTAAAACAGGGATTGAAAT
GCAGACGAAAAACGCAAATAAGAGAACAGACAAAATC
3320373
3320374
ATTCGATAGCAAGATCCATTAAAACAAAGATTGGAAT
3320410
Left flanking sequence : Till position 3314776 (length
bp)
GTATTTATAAAGGGTTTGATAATTTCCCAGCAAGAATTTTAGCCTCGAAAAAGGGCACATTTCCGGCCTT
TTCTGGTCAAATAACGGAAATTTTTGCCCT
Right flanking sequence : From position 3320410 (length
bp)
TCTATTTCTTCAAATTTTTCTAAAGAGGTTAACCAGAATGTCTAAGAAAATCGGCAGAAATGATCCGTGT
CCATGTGGTTCAGGTAAAAAATATAAACAT
Print the CRISPR sequence : From position
bp To position
bp