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CRISPRs details
NZ_CP009515_18
Flanking alignement tool
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NZ_CP009515_18                                                                                                                 
top
Strain :
Methanosarcina lacustris Z-7289 GCF_000970265
RefSeq :
NZ_CP009515 (chromosome circular)
CRISPR id :
NZ_CP009515_18
DR consensus (37 bp) :
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
Number of repetitions :
39
Begin Position :
2980927
End Position :
2983740
2980927
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CAGCAGGAACAGCTCCACTAACTATACAATTCAC
2980997
2980998
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AGGAAATAATCATCAGGGATAAATACTCAAAGAATTT
2981071
2981072
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CAGATCTTGCCGGGAATAAAAGGTTAAGCTCTTCACT
2981145
2981146
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATAGTATTCTTGCACTGCCTGGGATAGTAGACTCTATCGAAA
2981224
2981225
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CAGTCGTTTCTTTTTCATCTTCGGTATAAGTTCCT
2981296
2981297
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CCCACCCGGTAGTTGCATCGCACGCATCAATCACT
2981368
2981369
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CAGTTACGGTAGAGTTAGGCGCGGATCTTTTAACGGC
2981442
2981443
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AATTCAATGATTGAAGATGGATGGGTGGACTGAATGG
2981516
2981517
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ACTCAGCAAGTCTCTATAGAGAGAGAGAGTATTTTTT
2981590
2981591
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATATCGCATTGATCTTTGTACTCTCGTCAGGTGTTA
2981663
2981664
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTCCCCCGTTTCGTGAATATGAGCCCGTTTCGAT
2981734
2981735
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CATTTCCAGCACCAAGAGTAAATGGTCTGATAACT
2981806
2981807
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATTTGTCCTGATCAGTCTCAGCCTTCCGAGCAGT
2981877
2981878
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
GGCCACTGTTAGATTCAGTACTAATTAATCCAAGT
2981949
2981950
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
GTCTGTGTAAAGACTCTTTTCGTTTTGCAAGATATC
2982022
2982023
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TAAGCAATGAGTACATAATAAGAGTACAAGCAGGGC
2982095
2982096
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CAGAATAAGGATGTACTGTCTCCAGATTACATCCCAT
2982169
2982170
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
GTTTCATATCCTGATACTTTGATCTGTCCGGTTTT
2982241
2982242
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TCCTGGTTCCATTTTGAGTGATACCCGAATGTGAGG
2982314
2982315
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TGCAAACTTACAGCATGGCTCCGGAATCAAAGAAGA
2982387
2982388
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TGAATTCTCCGAGCGTCATTGATTTTGGATTTTTAAT
2982461
2982462
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATGCGAATTTTCGGGTTCTGAAATCAAGCGACTCGAA
2982535
2982536
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTCCTCCAATTACCTATATTCTTCAGGAAGCCC
2982605
2982606
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TGAAAACATGCCAACAGCCGAAGATAACGCACACG
2982677
2982678
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AGACAACATCCCTGCCATTCAATACAGTATTTCTAAG
2982751
2982752
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATTAAAAACGAACTTGCCCGCGCTCATGATCTCATT
2982824
2982825
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AAAACAAGATAAGTCGTCAATTTCATGAACGGAAA
2982896
2982897
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TGCAACCGGCCCGGATCAGGATCTTAAGCCGGTTGAG
2982970
2982971
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CAGGATCAAAAATGAGAGGGGAGTACATTATTTGCC
2983043
2983044
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATCGGGATCGGTACATCAAACTTAACGGGATTTTTC
2983116
2983117
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATCGGGATCGGTACATCAAACTTAACGGGATTTTTCA
2983190
2983191
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TCAATTTCGTTTTTTCTAATGTCTGCCATTTTTACAC
2983264
2983265
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TGGAAATGTTGGCAGGATGGATTGAATGTGTTTTC
2983336
2983337
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TAATATTAGTTCTTATAATAATGTACATCAATGTTGC
2983410
2983411
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TCCTGATATTCCCCTGTGCGAATCTCCCACTTTCCC
2983483
2983484
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTTACTGTATATGCTACTGCAGATACACGTATATAA
2983556
2983557
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATAACAACGCGTGTCAGTGGTTCGTCTTCGATGTCG
2983629
2983630
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAT
GTTGCAATGCCTGCAGCATTCACTATTGCTACAAAT
2983702
2983703
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
2983739
Left flanking sequence : Till position 2980927 (length
bp)
GTATTTATAAAGGGTTTGATAATTTTCCAGTAAGAATTTTAGCCCCAAAAAAGGGCTCATTTTAAGCCTT
TTCTGGCCAAACGCCGGAAATTTTTGCCCT
Right flanking sequence : From position 2983740 (length
bp)
CGTAAAAACTGTGCATAGCCTCCTGATACTGATTATGGAGTACATTTATTTTTTCAGATTTATTCAAAAA
AGTTCTTATGTTAAAAAGTCCTCTATACCC
Print the CRISPR sequence : From position
bp To position
bp