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CRISPRs details
NZ_CP009516_1
Flanking alignement tool
Page manual
  
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NZ_CP009516_1                                                                                                                 
top
Strain :
Methanosarcina horonobensis HB-1 = JCM 15518 GCF_000970285
RefSeq :
NZ_CP009516 (chromosome circular)
CRISPR id :
NZ_CP009516_1
DR consensus (37 bp) :
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
Number of repetitions :
50
Begin Position :
1011703
End Position :
1015295
1011703
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCCGTTCTTATTTCTTTTCCACAATGCCCACAGT
1011773
1011774
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCTGGTCCTGGTCTGATCTTCCATCGCATCCAGTAA
1011846
1011847
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
AACCTCGTACACTCCCAGGAATTCGACCTCTACCAAA
1011920
1011921
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGATCAAGCCAGAAGCAAGACAGCTTCTAGCCAG
1011991
1011992
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTCAAAAACAAAAAATCTTGGATGTACCATCGATGA
1012065
1012066
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAGAGTGTCCTGAGAGAAAACGCCCTTCTCATATGAAGG
1012141
1012142
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCATGGATGTTAATATAAGCGCAAGCGTCCGCCAT
1012213
1012214
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGAACCATTCTGCCAGAACTCCGATGATTTCAA
1012284
1012285
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACAACTCGATATCTGTATCCTGATAGCGGGACCAA
1012356
1012357
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
GATCATCTTAACGTATTTACGAATGTTTCAAAAAA
1012428
1012429
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAACATCATTTAAGTGAAAACCGAAAAGAATGGAGA
1012501
1012502
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATCCTCCAATGAAATAATTGCACTTGCAAATTCT
1012572
1012573
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGCATCGATATCGACGGTAACTGCTTCTTTTTTTG
1012645
1012646
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTTCTTTTTTCACAATAACAGCATGATATATATT
1012717
1012718
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGGATTTACCATAAGATTGCAGAAAAATTGTAGT
1012788
1012789
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
GCCAGCTTATGCCGAAAATAATAATATGATAGTGTA
1012861
1012862
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
GGCTTTTCGTCTGTACTTTACAACGAGTATAAGGTG
1012934
1012935
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTTTATAATGTGCTATCAGCCCGTTTTTTGGAATA
1013006
1013007
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTTCAACCACGCTTGACCACCTTCTTCAGATAGG
1013077
1013078
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCCAATGAAGGCATGTTTCATAAATTTGAAAAGA
1013148
1013149
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCGTGAAGCCTGGTAAACTGCATCAATACACAAGA
1013220
1013221
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
CATGTTTTGTAATTACTATCGAAAATGTAGTATC
1013291
1013292
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGGAGCAGTGTAGTCTTTTAGGTCGTCCCTTACG
1013363
1013364
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGACAAAAACCGAAGACGTAATAAATTTAATAAA
1013434
1013435
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCTTGAGAATCCCTGAAATACTCTTAATCTGTTCGA
1013507
1013508
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTCCGATTCTTTTTTCACCTGGCAAATAATCGCTGT
1013580
1013581
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
GCCAACTGATGCCTATCGCTCTGGTAATTGGTGGA
1013652
1013653
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
AACTGGAACAGAGATGTAAAAAATGTGCCTAATATCGG
1013727
1013728
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
AATGTTCTGCCGTGAGTATTGCCGAGAAGTCGCCAAAA
1013802
1013803
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGTCTCTTCTCATGTCTTCCTCATCTCCTCGTGTTT
1013875
1013876
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
CGAAGGAGGAACTTGCTTTTGCGAAGGAGTATTATGA
1013949
1013950
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TATAAATTGTTCTGGTAAATATCCTCACTCTTT
1014019
1014020
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
CATCTACGAATCTTCTGTGAAAAGTCTTCACCTGG
1014091
1014092
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATCAAATCCAAGTCACAAACCTGACCCGCCGCATT
1014163
1014164
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCTCTTGGAGGTTCTGAGATTGAGACTAGTAAGGG
1014235
1014236
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTGCATTGCTCCATTTGTAGAAGAAGGTTCTTATAT
1014309
1014310
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGTGGTACCGTCTAAACCTTTCATTGTTGAATCACA
1014383
1014384
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
CTCCCCATTTCTCAGGAAGTCAGGAAGTCCATAGG
1014455
1014456
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTTTCTTTTGTGGCTTGCTGGTGTGCATTTCTAT
1014527
1014528
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
GAACAGTATTCAAGATCTCCACCAGGAGGTGAGACA
1014600
1014601
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAAATCACTTCGTTCTGTTCTGTAAGCTTTTCCTG
1014672
1014673
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
AATCATATCTATATCCACAACAACGAGGTAAATACT
1014745
1014746
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTCATTTCTGCGTATTTCTTACGACATCTGCATACAAG
1014820
1014821
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACATCGTAAAGTTTGCTATGATTCCAACATGTCACG
1014893
1014894
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAAAATAATACGCTAATGCTCCAATTGCGCCGATTCCA
1014968
1014969
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCCCGCTATCAGTTTCGCCAGATAGTCCGAAGCCTC
1015041
1015042
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTTGTAATGGGCTAACATCGAACCTGGTATATTGTA
1015115
1015116
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACAGCGAACTTAAAGCTGTAACTGTAATCAAAAAGG
1015188
1015189
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
CACCGGCAGCAAAGAAGTCGGTTGCCCTGAGAA
1015258
1015259
ATTCGAGAGCAAGATCCATTAAAACAAGGATTGAAAC
1015295
Left flanking sequence : Till position 1011703 (length
bp)
GTATTTATAAAGGGTTTGATAATTTTCCAACAAGAATTTTAGCCCCGAAAAAGGGCATATTTTAGGCCTT
TTCTGGCCAAATAACGGAAATTTTTGCCCT
Right flanking sequence : From position 1015295 (length
bp)
ATCTAACTCTAAATAGATTTTTGGCAAACTTTAATGTATATTTATTTATCATATTATAATATATTATAAC
AGAATATGTCTACAATAGCTATAGACCCGG
Print the CRISPR sequence : From position
bp To position
bp