Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NZ_CP009961_1                                                                                                                 top


Strain : Thermofilum sp. 1807-2 GCF_000993805 RefSeq :NZ_CP009961 (chromosome circular)
CRISPR id : NZ_CP009961_1
DR consensus (25 bp) : CTTTCAATTCATTCCTTTCTGATACNumber of repetitions :139
Begin Position : 551074 End Position : 559846

551074ATAGTTATTCCTGCCTTTCTGATACCAACCATACACGGTGACACAAAGCTTTACAGATTCAAGCAC551139
551140CTTTCAATTCATTCCTTTCTGATACATAAGGGATATAGACTAGGAAACCATATTTTCTTTGTGAA551204
551205CTTTCAATTCATTCCTTTCTGATACCCGTGTAGTCGCGATTGTTGAACTCGCTCTTATCCTCCT551268
551269CTTTCAATTCATTCCTTTCTGATACGTTCAGTCTGGCAAAATTTTCTGTTTTCACGACCTCGG551331
551332CTTTCAATTCATTCCTTTCTGATACACAACTGTCGAACTATATAGACGCCCCGGAAAACTATAT551395
551396CTTTCAATTCATTCCTTTCTGATACGTGCTACATCAGGTGCTTCAATCCGCTACTACGTGGAAAC551460
551461CTTTCAATTCATTCCTTTCTGATACACGCTACCATTATTATGACGGCTACGCTTATAATGA551521
551522CTTTCAATTCATTCCTTTCTGATACCTCCGACAACGTGTTGTCGGGAACAGTGCCGGGCGGAC551584
551585CTTTCAATTCATTCCTTTCTGATACTATACAAACGGCTCGACGCTGCAATCTATTTGTTTGATAC551649
551650CTTTCAATTCATTCCTTTCTGATACGGGGGCCTTCGTGTTGTTGTTGATGCGTATCGGTTGAA551712
551713CTTTCAATTCATTCCTTTCTGATACGGTTCTATGCTCCATTCGCTACTCCGATCCCGAG551771
551772CTTTCAATTCATTCCTTTCTGATACTACTTCTCCCTCCACTCGATGTCAAGCCCCTTATTCTTCCT551837
551838CTTTCAATTCATTCCTTTCTGATACAAGAGCAACCGAAAAGAGTACGAATTTTGGACAAAGGA551900
551901CTTTCAATTCATTCCTTTCTGATACAAGCTCCTTACCGGATCCTCCCTAGGATACGAGAAAACG551964
551965CTTTCAATTCATTCCTTTCTGATACCTAAAGCCTCAAGCCCGTTGACGACCTCTTCACCGCCGA552028
552029CTTTCAATTCATTCCTTTCTGATACTAGACTTTTCATACAATTCTAACATGCACATGTCACCGC552092
552093CTTTCAATTCATTCCTTTCTGATACACTAAGAAACCCATCCGGGTCTTTAATGCCATGAACTCT552156
552157CTTTCAATTCATTCCTTTCTGATACACGCCACCTGTGGGGAGCTGTGGCTGCCGCGACCGTGGG552220
552221CTTTCAATTCATTCCTTTCTGATACACTTAACGCTTAAACTGTTGTTGAAAACTCGATAGAATAA552285
552286CTTTCAATTCATTCCTTTCTGATACCTTACCCTTAATCGTAGGTAAGTTTGGAAAACCCATATC552349
552350CTTTCAATTCATTCCTTTCTGATACTTTAACGCTATATAGTCTTCTAGAGAACATACATAGCTCATG552416
552417CTTTCAATTCATTCCTTTCTGATACGAGGTCGTAGCTCCACTGAATGTTCCCCAATGTATCTTTT552481
552482CTTTCAATTCATTCCTTTCTGATACATGACAGATCTGTAGCCTCCACCCCCCCACGTCTCA552542
552543CTTTCAATTCATTCCTTTCTGATACGATATATGCAAAAATGTATATAGTATACAAAAAA552601
552602CTTTCAATTCATTCTTTTCTGATACTTTAACAGGGGCAAAGCCACTGCCCCGCGAACAAATAGA552665
552666CTTTCAATTCATTCCTTTCTGATACAACGGCTATGAAATTGCAATAACGGTAAACCCAAAT552726
552727CTTTCAATTCATTCCTTTCTGATACACGCATCATCAGTGCAATACGAAAATACGTGAATG552786
552787CTTTCAATTCATTCCTTTCTGATACAAACCCCCACTGTCTCTCTCCTGTTGAGCTACAACTAT552849
552850CTTTCAATTCATTCCTTTCTGATACAGCTACGGGTAGGGCTCGCGTGGGCTATTGCTATGCAC552912
552913CTTTCAATTCATTCCTTTCTGATACAACGCTAACGCCTTCAACGTAAACTGTTTGCCTGAC552973
552974CTTTCAATTCATTCCTTTCTGATACCAATCAGGGTATATCAATGTATACTGGTTGGGGTGAAGA553037
553038CTTTCAATTCATTCCTTTCTGATACGGTTCACCTACAAATATATCAGTTAACGTTAA553094
553095CTTTCAATTCATTCCTTTCTGATACATACCCAAACCGCACTGTATATGTAGCTATAGTTGACCC553158
553159CTTTCAATTCATTCCTTTCTGATACCTGCGACGTCCCAAAGTGGACTGGAGAAGCGTTATCCG553221
553222CTTTCAATTCATTCCTTTCTGATACGCATACAATAACCTGATAAAAATGCAAGCGATAG553280
553281CTTTCAATTCATTCCTTTCTGATACCCAGTTACCCCGGCACTCCTACTCTTCCTCCCCTTCAGCT553345
553346CTTTCAATTCATTCCTTTCTGATACCTGAGCGGCGAGGCTTCGCTTCAGCCACAGCCGTTCTATG553410
553411CTTTCAATTCATTCCTTTCTGATACCTCCGACAACGTGTTGTCGGGAACAGTGCCGGGCGGAC553473
553474CTTTCAATTCATTCCTTTCTGATACTATACAAACGGCTCGACGCTGCAATCTATTTGTTTGATAC553538
553539CTTTCAATTCATTCCTTTCTGATACGAGGTGACGTGGATGACCGAGCCGGGACGGGTTGTCA553600
553601CTTTCAATTCATTCCTTTCTGATACAACCCCCACGCTAACAAAATTGCCAGACCGGAATCCCC553663
553664CTTTCAATTCATTCCTTTCTGATACGAGCAAGAACGTGCACGTGCTACTCTGCGTAGGCTAGCT553727
553728CTTTCAATTCATTCCTTTCTGATACTGGACGGTCTAGGACGCGTGTGGGGATTCAATAGACGT553790
553791CTTTCAATTCATTCCTTTCTGATACATAAGTGTCCGATTTGCGGAAAGGAATACAAAGAGTACAAGATTCTAG553863
553864CTTTCAATTCATTCCTTTCTGATACTGGTAGCTTTAGCATTAAGAAACAAGAACCAATTACAAGAATTAA553933
553934CTTTCAATTCATTCCTTTCTGATACTAATCGATTTGACAGGATGCAAGCCGTTATCGCGTG553994
553995CTTTCAATTCATTCCTTTCTGATACAAGGACAAGATTCCATTGGTGAAATGGGAGGAATAACAG554058
554059CTTTCAATTCATTCCTTTCTGATACCAAGTACGTATCGCAGCACAAGAAGAAGCGAGACGTCTA554122
554123CTTTCAATTCATTCCTTTCTGATACTCGTAAATACTGCAAGTCAGCTTGCTGGGAAGCTCAG554184
554185CTTTCAATTCATTCCTTTCTGATACATCCAGGCAAGCCTTGAGTTTGCGACAGAGCGAGATTT554247
554248CTTTCAATTCATTCCTTTCTGATACTGGAAGCTCGTGGATTTCGTAAGCCTAGACCACGGACT554310
554311CTTTCAATTCATTCCTTTCTGATACACTTCTAGGGGCTTGACTGTCTCGTGTTCCACAGCTG554372
554373CTTTCAATTCATTCCTTTCTGATACGCAAACGTGGCGGCAGATTGTGCCGCCAACACTCTCCTGTT554438
554439CTTTCAATTCATTCCTTTCTGATACCTTTATTTGTAGCTCTGTTTCTGTCATGTTTGTTCA554499
554500CTTTCAATTCATTCCTTTCTGATACATTTTCCAAGCTATTTTCTGTATGTTTTTTTGGTTCATCT554564
554565CTTTCAATTCATTCCTTTCTGATACGAATAGATGTGGCGATGAAGTATTCAGGAAAACGAG554625
554626CTTTCAATTCATTCCTTTCTGATACTTAGTAATCATGCCCTGTCCTTCATATTTGATTTTTTTA554689
554690CTTTCAATTCATTCCTTTCTGATACTGCGACGTTGCCATACGTGCTTATGTCCAGGTTTTCCG554752
554753CTTTCAATTCATTCCTTTCTGATACGCGTCGTGATGTCCTTGATTCAAAAGTTCTTCTCTAATG554816
554817CTTTCAATTCATTCCTTTCTGATACTTATTAGTGTACGTATAGCTATGAATGTGCCTCCGTATGA554881
554882CTTTCAATTCATTCCTTTCTGATACAAGGGGTTTTTCTCTAGCCCGGGTTTTTCCTCTATCT554943
554944CTTTCAATTCATTCCTTTCTGATACTGAGAGTCGGGCAAGCGGGAAAAACCCTGCAGGTGGATT555007
555008CTTTCAATTCATTCCTTTCTGATACCAGCCGTCGACGCCCAGGCTTCCGTTGCCGGCCGAGCCTA555072
555073CTTTCAATTCATTCCTTTCTGATACCTGTTGCGGGGCTTCAAGCACCCTGTTGCCTACAACC555134
555135CTTTCAATTCATTCCTTTCTGATACTTCTTGAAAATGGCGTATCCTCACCGCTTAAATTCCA555196
555197CTTTCAATTCATTCCTTTCTGATACACAACCGGCACCTGTGAAGGGGTGATACTAGTCAT555256
555257CTTTCAATTCATTCCTTTCTGATACATGTAGATGATGTAGAGTATTAGGCTTAGCGTGACGG555318
555319CTTTCAATTCATTCCTTTCTGATACAGCGTAAGCATTTCGTTTGAAAACACCATTGTCATAGAC555382
555383CTTTCAATTCATTCCTTTCTGATACAGGAGGGAGGGCGACTTCGCGTTTTACAAGTATAA555442
555443CTTTCAATTCATTCCTTTCTGATACTACGTTTGAAGAAACGTCTCGAAAGGCCCGAAGACATCA555506
555507CTTTCAATTCATTCCTTTCTGATACAAAAAGGTCCCGCGGGACCTAGCGGGACCTAAAGCCAAG555570
555571CTTTCAATTCATTCCTTTCTGATACGTACTTACAATGGCTTAGGAAATTAAAGTATCT555628
555629CTTTCAATTCATTCCTTTCTGATACCAACGCCTCCTGCTTGCTCTCTGCTGTGAGGGCCGATG555691
555692CTTTCAATTCATTCCTTTCTGATACCCCACGACCACACTGTTCAACACCTTCTCAACCG555750
555751CTTTCAATTCATTCCTTTCTGATACTTATTCGGTTTTTTCTCCGGGCTTGACGTCCTGGTGTGAC555815
555816CTTTCAATTCATTCCTTTCTGATACTCGGGACTTCAACGAACTCAAAGCACTCCTCTCTCCTCT555879
555880CTTTCAATTCATTCCTTTCTGATACAGACGTTCTCCGCATTCCTGGAAAGGCTAAGTGTAATTA555943
555944CTTTCAATTCATTCCTTTCTGATACATGTCAAGTGGTTCAACGAGCCACGAGTCCCCAGCATGCC556008
556009CTTTCAATTCATTCCTTTCTGATACCCCACTGGCTAGCTGTGGTGAGGGGTTGCTCGAGTTGCT556072
556073CTTTCAATTCATTCCTTTCTGATACCCTGGGTAGGGGGTTTTTATGGCGCGTGTCATAGTTGTA556136
556137CTTTCAATTCATTCCTTTCTGATACACTATAGGCTGTACGTGCACCAGATTACCTGAGCTGT556198
556199CTTTCAATTCATTCCTTTCTGATACAGGAGGGTGGGGAGGAGGGGGAGGAATCAAGTGATGAGCG556263
556264CTTTCAATTCATTCCTTTCTGATACAAGCTTCTTAGTTCTCACATCCACAACTTGGCTAGCCA556326
556327CTTTCAATTCATTCCTTTCTGATACCGGAGCTATGGGTGAAGATGGCTAGCAGGGATGACGCCCC556391
556392CTTTCAATTCATTCCTTTCTGATACAGCATTTTTATTGCATTTTTTATTTCTTTTTTCATCT556453
556454CTTTCAATTCATTCCTTTCTGATACAATAAAAAACGCGGGCTGGCCTTTGGGCATGTA556511
556512CTTTCAATTCATTCCTTTCTGATACATATATACCAGGTGGCTACGAGTGGGGTGAACG556569
556570CTTTCAATTCATTCCTTTCTGATACAGAATCTGTTCAAGTTCCTGTCGTGATTTCACAAATCTCAA556635
556636CTTTCAATTCATTCCTTTCTGATACTGAAGACCGAGAGGTGACCAGGAGTGGACTTCAG556694
556695CTTTCAATTCATTCCTTTCTGATACGCATAGAGCGTGTTGCCCGCAGAGTCCAGGAACGTGGC556757
556758CTTTCAATTCATTCCTTTCTGATACGTACACCACAGCTGTGATTACAACCTCTCTTTCAACTCGT556822
556823CTTTCAATTCATTCCTTTCTGATACCTTTTTCAGTCACATACACCATTACAGTAATATTGCAGG556886
556887CTTTCAATTCATTCCTTTCTGATACCCCGCGTCATACCCGAGAAGACGGTTATGTTTGCGGAT556949
556950CTTTCAATTCATTCCTTTCTGATACCCATACTCGGCCGGCGGCATCCGTTACCTCGCGCTC557010
557011CTTTCAATTCATTCCTTTCTGATACGTCCGTGACCAGGCTCCCAGGAAGCCACTCGTCCC557070
557071CTTTCAATTCATTCCTTTCTGATACGTAAGAATGGTATGAACATTACTATTTCGGCCCAGACAT557134
557135CTTTCAATTCATTCCTTTCTGATACATATAGCTAAGGGAAAAAACTATATAGCTAGCAAAATCT557198
557199CTTTCAATTCATTCCTTTCTGATACATAATCGAGGCTTTCGCAAACCAGGGTCTTGACAGA557259
557260CTTTCAATTCATTCCTTTCTGATACACCTACTATACCCTCGTATGACAGTTCTGTCACACCAGTA557324
557325CTTTCAATTCATTCCTTTCTGATACTAGTATGCTACCTTCTTTTGCGACATCAGTAGGA557383
557384CTTTCAATTCATTCCTTTCTGATACCGGAGTTTTTCCCGCTTGCCAGACTCCCACTCCCTCAT557446
557447CTTTCAATTCATTCCTTTCTGATACACGGGCATTTAAAATCAGGAGTCGGGGGGTCATCCATCC557510
557511CTTTCAATTCATTCCTTTCTGATACAAGCCCTAACCGCCGTAATAGCTTTATAATTGCTAACAC557574
557575CTTTCAATTCATTCCTTTCTGATACGTGGTGGTTGTGGTTGTGTGGTTGATACTTGTATATCATA557639
557640CTTTCAATTCATTCCTTTCTGATACTATAATCAGATGCTTTACGTATTATTACAACTCTTTCA557702
557703CTTTCAATTCATTCCTTTCTGATACCTCTCAATTCATCTGTGCTCTTGAATTCAATACCGCAAAAT557768
557769CTTTCAATTCATTCCTTTCTGATACGCCTTTTGTAGGAGCTTGGAAAAAAGCAGTGTAATGAT557831
557832CTTTCAATTCATTCCTTTCTGATACTCTCGTGTTTTCGACGCGTGCCGGTGTCGGGTTCGG557892
557893CTTTCAATTCATTCCTTTCTGATACATGTAAACAGGGACATTGATGCGACATGCTCAGAGCT557954
557955CTTTCAATTCATTCCTTTCTGATACCGCCGAAGAGCCTGACTGGGAGGATGTATTTAACCACACG558019
558020CTTTCAATTCATTCCTTTCTGATACCTGTGTTGTGAAACTCGTAAGGAAACCCGTGTCAGTATT558083
558084CTTTCAATTCATTCCTTTCTGATACACAGGTGTGCCCAAGGGGATTAGTACCTGTCTAGGGTGTCAC558150
558151CTTTCAATTCATTCCTTTCTGATACTAGGGCTCCACGGGGCTACGTGTTCAAGAGCGCGACAGG558214
558215CTTTCAATTCATTCCTTTCTGATACCGCATACTACTCGCTAGCTTCAACGCCTTCTCGGTTAC558277
558278CTTTCAATTCATTCCTTTCTGATACCCGAGGAAGTTGTCTTCAAAGTCGTCTTCAAGGTAGACTT558342
558343CTTTCAATTCATTCCTTTCTGATACGGTCGAGTCGGGCCTGGCAGACCGGACACGGCTGATAATAAT558409
558410CTTTCAATTCATTCCTTTCTGATACTAATTTTATTTTTTGTTCTTGTAGCGTTTCTCTCCTTTA558473
558474CTTTCAATTCATTCCTTTCTGATACAGGCAATACAGGTCGCGTCGCAAGTGCTGGGACTTGAC558536
558537CTTTCAATTCATTCCTTTCTGATACAAGGACGCCGTGAACGTCCTCCAGAGCCTTCTATCAGG558599
558600CTTTCAATTCATTCCTTTCTGATACAGTGTTGAGCCGGGGGGTGACAGAACTGTCACACTTGA558662
558663CTTTCAATTCATTCCTTTCTGATACAGGGAAGCATTTTCACGGTCATCCCCTCCGGGCTCGGTG558726
558727CTTTCAATTCATTCCTTTCTGATACTTATATTGTTGTTAGGGTCATATATATCAAGGTTATATGCATA558794
558795CTTTCAATTCATTCCTTTCTGATACACCTTAACCTTGTTACTTGACAACTCAAATCACCTTTT558857
558858CTTTCAATTCATTCCTTTCTGATACGGAGGGAAGGGCTGTCGAGACAATCTACACTTATGCTACTAG558924
558925CTTTCAATTCATTCCTTTCTGATACATACGTATTTCCGCCTCGGCTTGGCGAAGTCTGCTTTCCGCAA558992
558993CTTTCAATTCATTCCTTTCTGATACCCTTGTAAAAATTATGATCACAGCTGTGGAACACG559052
559053CTTTCAATTCATTCCTTTCTGATACGTAATACCTCATAATGAGTTTATAATGAAACTTCATTAT559116
559117CTTTCAATTCATTCCTTTCTGATACGTGATGTTTGCAGGAGTCCCTGCACTCGTGGTGGCGG559178
559179CTTTCAATTCATTCCTTTCTGATACAATAAGAACGTGCACTTCATAGTGCCGTTCCGACGCGAGGG559244
559245CTTTCAATTCATTCCTTTCTGATACTAGCTAGATGTCAACATTTGAGTGGGATGCTGTCACATC559308
559309CTTTCAATTCATTCCTTTCTGATACCCAAATCGGCTTTCCGAGACCTTTGCCAGTCAGAATAGT559372
559373CTTTCAATTCATTCCTTTCTGATACAGAGACTAAGTGAAGCTGTAGGCAAAACATTCCAGTGGA559436
559437CTTTCAATTCATTCCTTTCTGATACCCACACAGTGCTGTGTTTAAGATTCCTAGCGTTACTGTAC559501
559502CTTTCAATTCATTCCTTTCTGATACCCAATCCAAAAGCCAATATGTTGAACCCCTAATCTCCTGT559566
559567CTTTCAATTCATTCCTTTCTGATACCTGGAGGGTGAAACACCGGGAATCACGACAGACCCGT559628
559629CTTTCAATTCATTCCTTTCTGATACACACGTGGTGGAGCACGTGGGGTATCATCCAGTTGATGCC559693
559694CTTTCAATTCATTCCTTTCTGATACGTAACCCTCCGTCGTACTCCTGAACATAGTCACGAACT559756
559757CTTTCAATTCATTCCTTTCTGATACCCGACGTCGACAGGATTTTCGTGATGAACGATGCTGAATG559821
559822CTTTCAATTCATTCCTTTCTGATAC559846
Left flanking sequence : Till position 551074 (length bp)
GAAGGATCTAAATCCACTTTACCTCATGAAAGATTTTAATAGCTGCTAGCTTCATTTCATTAAATATTTT
AAAAAGACTACTTCTTTCCTATCTCGCATG
Right flanking sequence : From position 559846 (length bp)
CGCTTCTTGTTTTTTGTATTGTGGGGGTTGTATTTATTATTTGTTTAAATGTATGTGGTATTTTTTCCAG
GTTTTTTCTATGTTTTTTGATAATGATTCT

Print the CRISPR sequence : From position bp To position bp