Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010177_4                                                                                                                 top


Strain : Escherichia coli GCF_001900885 RefSeq :NZ_CP010177 (chromosome circular)
CRISPR id : NZ_CP010177_4
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :11
Begin Position : 2391253 End Position : 2391890

2391253GTGTTCCCCGCGCCAGCGGGGATAAACCTAATGCAGTACGCGCCGGATCCGGTGTTACGTC2391313
2391314GTGTTCCCCGCGCCAGCGGGGATAAACCGCATCCGTTCAAATTCCATCAGATAGCAAACCA2391374
2391375GTGTTCCCCGCGCCAGCGGGGATAAACCGTATTGTTGACTGCTACGAATACGCAGACGAGC2391435
2391436GTGTTCCCCGCGCCAGCGGGGATAAACCGGCGACGATACCTGTGCGAGCTGAATAAAATAA2391496
2391497GTGTTCCCCGCGCCAGCGGGGATAAACCGGAAAAGCTACTTTTGTGTTCAACTGATGCATT2391557
2391558GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCGCAAATCCAGCGAGCCGCCGACGCTCA2391617
2391618GTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCAAACCGTGGCAAACGCAATTAACAAAAA2391678
2391679GTGTTCCCCGCGCCAGCGGGGATAAACCGATTGTTATAATTATTTATTGAAATATCATTCC2391739
2391740GTGTTCCCCGCGCCAGCGGGGATAAACCGAATCTATTGTGAATTTGAAATGGTCCAGCACT2391800
2391801GTGTTCCCCGCGCCAGCGGGGATAAACCGGGTAAAAACACGGTCTGAACCGACATTCATGT2391861
2391862GTGTTCCCCGCATCAGCGGGGATAAACCG2391890
Left flanking sequence : Till position 2391253 (length bp)
ATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAA
TTTGTTTAAAAACAGATATGTATGCTTAGT
Right flanking sequence : From position 2391890 (length bp)
GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCAT
TTTCAAACCCATCAAGACGCCTTCGCCAGC
Print the CRISPR sequence : From position bp To position bp