Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010312_2                                                                                                                 top


Strain : Geoalkalibacter subterraneus GCF_000827125 RefSeq :NZ_CP010312 (plasmid pGSUB1 circu)
CRISPR id : NZ_CP010312_2
DR consensus (37 bp) : GTTGTAATAAGCTGTAAAGTGTTGCGGCTTTGGAAACNumber of repetitions :13
Begin Position : 160059 End Position : 160988

160059GTTGTAATAAGCTGTAAAGTGTTGCGGCTTTGGAAACCTGGCCGCAGGCATCAAGCCCGAAAAACAGTGGGTC160131
160132GTTGTAATAAGCTGTAAAGTGTTGCGGCTTTGGAAACGAGCCCCTCACAGGACAAGGGCGCCAGATCATGCATAGAT160208
160209GTTGTAATAAGCTGTAAAGTGTTGCGGCTTTGGAAACAGCAAGAATTCTTGGTTAATGTGAGGCGCGTAGATTCAG160284
160285GTTGTAATAAGCTGTAAAGTGTTGCGGCTTTGGAAACCATACTTGGCGTCGCCGAAATAGTCATGTATCGCAT160357
160358GTTGTAATAAGCTGTAAAGTATTGTGGCTTTGGAAACAGATGTTTACCTTTAAATAAGGGCGAAAAACGACCTTT160432
160433GTTGTAATAAGCTGTAAAGTGTTGCGGCTTTGGAAACACCCTTCTTCAAATTAACGCAGTACCGGTTTTGACCG160506
160507GTTGTAATAAGCTGTAAAGTGTTGCGGCTTTGGAAACAGTCAATCCTTTAGTGAGATAGAGCTTCTGCGCGGCA160580
160581GTTGTAATAAGCTGTAAAGTATTGCGGCTTTGGAAACCTCGACGAGCAGTAGGCCCTGATTACCCATCGACCT160653
160654GTTGTAATAAGCTGTAAAATATTGCGGCTTTGGAAACAAGTATTTCCCTCGCTTCGATGGAAAGAGAAATTCAC160727
160728GTTGTAATAAGCTGTAAAGTATTGCGGCTTTGGAAATACGTGTTTTTGGCGGATGGGACCGGGCGCAAGGCAAAT160802
160803GTTGTAATAAGTTGTAAAGTGTTGCGGCTTTGTAAACTAGCGCAAGCTAGTGCCATCGATCATACGATGCTTAGGG160878
160879GTTGTAATAAGCTATAAAGTGTTGCGGCTTTGGAAAATGATTGGTTTTGGTGATTCTTGCATACAATTGCCCC160951
160952GTTGCAATAAGCTGTATTTTGTTACGGCTGTGAAAAT160988
Left flanking sequence : Till position 160059 (length bp)
ATTTTTCAGAAAAAAGCCGGAGATCTTTCTGGACAAAGCTTCCAACCCTCTCGAAAAACAAAGGCTTAAT
GCCTATTAGGTGGGGGTAAACAAGAGGACA
Right flanking sequence : From position 160988 (length bp)
GGCCTTCTCACAAGTTGCGAAATCTCGATATCACACGTTGCAATAAGCTGTATTTATTACGGCTTTGGAA
ACATGTGTGAAATATCATACTCGCCCTGAT
Print the CRISPR sequence : From position bp To position bp