Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010408_1                                                                                                                 top


Strain : Streptomyces vietnamensis GCF_000830005 RefSeq :NZ_CP010408 (plasmid pSVL1 linear)
CRISPR id : NZ_CP010408_1
DR consensus (29 bp) : GGGACCGTCCCTGCCCGCGAGGACCGCACNumber of repetitions :8
Begin Position : 14019 End Position : 14476

14019GGGACCGTCCCTGCCCGCAAGGGCCACACCCGTTTTTGCCGGACTGCGTCGTCGACTGGCG14079
14080GGGACCGTCCCTGCCCGCGAGGACCGCACCGGCTCCATCCGGCCTCGCGCACAGTTCACGCGC14142
14143GGGACCGTCCCTGCCCGCGAGGGCCGCCCAAGATCTCGGCAAGCCGGGTGGCCGTGCCCGC14203
14204GGGACCGCCCCTGCCCGCGAGGACCGCACCTCCCCGGTCCGCACGACGACGGACCTGAACA14264
14265GGGACCGTCCCTGCCCGCGAGGACCGCACAGGGCCTGGATCTGCCGCTCGATGGCCTTGAT14325
14326GGGACCGTCCCTGCCCGCGAGGACCGCACCCCGGTTCCGGGCCGTCGTGGTTCATCGACCA14386
14387GGGACCGTCCCTGTCCGCGAGGACCGCACTCGTCCAGGTCTTCAGCGATCTCCGCGGGCGG14447
14448AGGACCGTCCCTGTCCGCGAGGACCGCAC14476
Left flanking sequence : Till position 14019 (length bp)
GCGGGCTCTCGGCCATCAGGCCGGCACCACCTGACACGTTGACGGTGGTGGCCGCAAGGAGTCGACTCGT
CGCGTCTGCCTGTCGGTGGCCTCCGCTACA
Right flanking sequence : From position 14476 (length bp)
CCTTGCCGAGCTGGGCCTTCTCGCCAGGAGGTGAACTCCTGACGCCACTTTCGAGTTTTCCGACAAAGGT
GGCATTCCGCGTGTTCCGCCACGGGCGTGT
Print the CRISPR sequence : From position bp To position bp