CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_CP010411_5
Flanking alignement tool
Page manual
  
Home Page
NZ_CP010411_5                                                                                                                 
top
Strain :
Bifidobacterium longum subsp. infantis GCF_001281305
RefSeq :
NZ_CP010411 (chromosome circular)
CRISPR id :
NZ_CP010411_5
DR consensus (33 bp) :
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
Number of repetitions :
58
Begin Position :
1537290
End Position :
1541154
1537290
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
AGGTTCGAGCTTGACCATTCGCCCAGGTTCACGT
1537356
1537357
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CGCGCGTCATGGGACTCGATGACGAAGGGAGAA
1537422
1537423
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CTCGACCAAGATCAGCCCGTCCCTATCGTTGAATT
1537490
1537491
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
ATCGCACGCATGATCAGCAGCCTGCCCCTCAAGG
1537557
1537558
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CACTTGTCCTTGGTCTCTATGGGGTTGCCGCCGC
1537624
1537625
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
AACGCTTCCTCGACCTGCTGGTCCCACCGTTCGA
1537691
1537692
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
ATTATTTCTGAAGGGATTTTCCCGAAGAAGCGGC
1537758
1537759
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CCGTGTGGGGTTGGTGCGGCTCATTTGACGAGGTT
1537826
1537827
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CTCAGTAGGAATTCTGGCGTGATCGTCAAGACC
1537892
1537893
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
GGCCAATGTGGCCAAGTCCGACGCGGCTTCGGCCA
1537960
1537961
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
AGGACGTCCCAGCTCTTCGCGTCGGGATCGCTGTA
1538028
1538029
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CCATATCGCAACTGCCTTATCTATGTCAGGCGC
1538094
1538095
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CCAAAAATACTATATCATGATGTCCGTAAAAACAA
1538162
1538163
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
TACAACATCCTTAACCAGATATTCAAGGCGGCGGTGG
1538232
1538233
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CATGTGGCGGAAACACCAACTCCGTCTCCCTCG
1538298
1538299
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
ATTGACCCCACCATGAGTGTGGAACAACGGGTATGC
1538367
1538368
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
ATGGACGCGTACTGCGCCTTCCACAGCATGCAAT
1538434
1538435
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
TTCCTGTAGTTCTTGCCTTTGCCTCTGTTGATC
1538500
1538501
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
ATCACTATGTCGCCTATGGAGACGCCCGTCACCTC
1538568
1538569
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
TCGCTCTCATCGGTGGTGGTGGGCTTGGCGGACT
1538635
1538636
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
TTCGATACGCTTCGCCTCCGAGATGATGTCCCGG
1538702
1538703
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
AACAACGTCGAAAGCATCGAACAGGTGGAGGCCG
1538769
1538770
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
TCGGCACGATGACGGCGGCCTCCTCACCGGCTTCG
1538837
1538838
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CAAGCGGAGCCATCCCACACCAAGGTGTCGATCA
1538904
1538905
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
TCGCCAAACGGTTCGGCGGCACCCCCTGGGCATGGC
1538973
1538974
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
TTTTTATAAGGCGCAATGCGCAGGAATGAATAAAA
1539041
1539042
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CATACCCACCGGCTCGCACAAAACCCATAGGCGAAC
1539110
1539111
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CAATCCGAGCGCGCTGCAGGTCATGAAGCATGAGA
1539178
1539179
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
GCCGTCGCCGTTTTCATGGGCTTATGGCAGTGC
1539244
1539245
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
AGGTCATGCAGCATTCTGTTGGCGCTCTCGTATC
1539311
1539312
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
GATTCCGATTTGGATGATGTGGCGCGCACCATC
1539377
1539378
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
TTGATGATGAACCGGCCCCGATCACTCAAGAGA
1539443
1539444
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
ACCTGGCTGAAGGGCGCCGTCACCGGCGACCATCA
1539511
1539512
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CTGATGGCCGGACTGACCGACTCCTACCAGTCGCTG
1539580
1539581
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CAAAAACTCAACCAGCTCGTCCTGGAAAAATAAC
1539647
1539648
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
ACCTACACGGCGTCCGGCGGCGTGATCCGCTGCC
1539714
1539715
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CACGTGAGACGCTATTGCCCGCAACCCGAACG
1539779
1539780
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
ATCGAAAACGCCCACGCCGCAGGCATGAGCGAAC
1539846
1539847
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CTGGACGGACGGCGAGGTGCTCATAGACGAGGATC
1539914
1539915
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
ACGATCCTCGGCAAGCGCAGGACGCTGGCCATC
1539980
1539981
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CCGCTGACCGGCGATACGGCGACGCTCGAGAGG
1540046
1540047
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
GACGTATTCGCGTAGAAGAACCGGGCCTCGGCCTCC
1540115
1540116
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
GTCGGCTGTCAGATACACGTGGCGTCGACGCTGT
1540182
1540183
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CAGTACGTGAAATGAGACATTGCCATAAGATTCGC
1540250
1540251
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
GGAGTTGATGATGATGTTGTGGCCTATTTGGAG
1540316
1540317
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
ATTGTCCTCATAGGAGGGTGTACGAACTACGGTA
1540383
1540384
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CAGAAGGTTTCGGCCTGCTCCCCTCATCACCGGAT
1540451
1540452
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
TCCATGGTGGAGGTATTGCGCGCCGAGGCCGC
1540516
1540517
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
GAATGCAACCATCGACAAGACCGGCAAACTCAC
1540582
1540583
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CTTCGAATGGAGAACGTGTTGGCCGATGAAGCGT
1540649
1540650
GTCGCACCCCTTACGGGGTGCGTGGATTGAAAT
ATGTCCGCAAACTGCATGGTCTGCTGGTTGCCGAGA
1540718
1540719
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
AACCAATTATACGAGTCCGCGCGGAAAAAATTCGAC
1540787
1540788
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
CGTTCGTTCGTGGACGAATGGGGCGGGTTGAAA
1540853
1540854
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
AACGACATCGACTACCAAATCGGCATCATGCTCG
1540920
1540921
GTCGCACCCCTCACGGGGCGCGTGGATTGAAAT
ACGGTGCGCACGTCCGTGGGGTCGCCGTTCTGATA
1540988
1540989
GTCGCACCCCTCACGGGGCGCGTGGATTGAAAT
TGGAACTGTACGCCGACCCGACAAGCAAATACCAT
1541056
1541057
GTCGCACCCCTCACGGGGTGCGTGGATTGAAAT
GGCATGACGTGCCAGCCACATTCGCGGCGGAT
1541121
1541122
GGTCGCACTCCACTGGGGTGCGTGGATTGAAAT
1541154
Left flanking sequence : Till position 1537290 (length
bp)
TTTGCGTATCTGGGGGAGATGCGAGTGGGTTGTACAGTACAATCGATGCTAAGGAGTGGTCGGAGTGTCC
GTATCTTGGGATGCGAAGTCCATTCCCGCG
Right flanking sequence : From position 1541154 (length
bp)
CTGAAAGGCGACAGCCTGTACATAGCCGGCGAAGTCGCACTCCACTGGGGTGCGTGGATTGAAATCTGAA
AGGCGACAGCCTGTACATAGCCGGCGAAGT
Print the CRISPR sequence : From position
bp To position
bp