Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010816_5                                                                                                                 top


Strain : Escherichia coli GCF_000833145 RefSeq :NZ_CP010816 (chromosome circular)
CRISPR id : NZ_CP010816_5
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :14
Begin Position : 2705339 End Position : 2706161

2705339TGGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTC2705399
2705400CGGTTTATCCCCGCTGGCGCGGGGAACACACACGCCCTTATCAAATAGCTGTGATTTACCTA2705461
2705462CGGTTTATCCCCGCTGGCGCGGGGAACACATAGACCCCGAACAACAATACGCGCAAACCGA2705522
2705523CGGTTTATCCCCGCTGGCGCGGGGAACACTACCGTACAGACTGCCGGATATTATTTTTTTG2705583
2705584CGGTTTATCCCCGCTGGCGCGGGGAACACCTGCTGCTCGAGCTGGTGGAGTGCTGCTATAG2705644
2705645CGGTTTATCCCCGCTGGCGCGGGGAACACAACGTCAGGTTGTCGCCGCTCTGCGTGGTCGC2705705
2705706CGGTTTATCCCCGCTGGCGCGGGGAACACTGCATGGCTTTGGCTTCCTCTTTGACGGACGC2705766
2705767CGGTTTATCCCCGCTGGCGCGGGGAACACATATATCAGAGCAAAAAACAAAGCCACAGCCA2705827
2705828CGGTTTATCCCCGCTGGCGCGGGGAACACCATAAAGAAACTATTTTGCGTTTCGTTCAGGT2705888
2705889CGGTTTATCCCCGCTAGCACGGGGAACACTTTTACAGTGTCAACAATCGTTCCCTGATTGT2705949
2705950CGGTTTATCCCCGCTGGCGCGGGGAACACCCGCCGTTGGCACCGTCAAACTCCGGTACTGT2706010
2706011CGGTTTATCCCCGCTGGCGCGGGGAACACTATAGAGATCGTTTTTGGAATTTACAGCGAGG2706071
2706072CGGTTTATCCCCGCTGGCGCGGGGAACACCCGTAAGTGGTTTGAGCGATGATATTTGTGCT2706132
2706133CGGTTTATCCCCGCTGGCGCGGGGAACAC2706161
Left flanking sequence : Till position 2705339 (length bp)
CATGGAGAACTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTATTACAAGTACTGCTAATATAAA
AACTTGAGAAAGAGATAACGGGTTATATGG
Right flanking sequence : From position 2706161 (length bp)
TCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTATAGTATCAC
ACAAACAACACATCCATTATGTTAAAGAGT
Print the CRISPR sequence : From position bp To position bp