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CRISPRs details
NZ_CP010888_4
Flanking alignement tool
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NZ_CP010888_4                                                                                                                 
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Strain :
Clostridioides difficile GCF_001577795
RefSeq :
NZ_CP010888 (chromosome circular)
CRISPR id :
NZ_CP010888_4
DR consensus (34 bp) :
AAAATCAAACAGAAAAAATATGTATGGAAGCAGT
Number of repetitions :
9
Begin Position :
1402040
End Position :
1402601
1402040
ATAATAAAACAGAAGAAGAATGTTTAGAGCTAGT
AAGAAAAAATGGATTGAATTTAATATACATAA
1402105
1402106
AAAATCAAACAGAAGAGATATGTCTAGAGGCTGT
TAGACAAAATTGTAATGCAATAAAATGTGTTC
1402171
1402172
AGAATCAGACAGAAAAAATATGTATAGAAGCAGT
TAAACAAGATTGGAGAATGTTAGAATTTGTGG
1402237
1402238
AAGAGCCAACAGAAGAAATTTGCATGTTGGCTAT
TAACCAAGATGGAACAGCATTAAAATATATAG
1402303
1402304
AAAATCAGACAGAGGAGTTATGCTTAAGAGCCGT
TGAAAAAAATGGTGCGGCTTTGGAGTATGTAA
1402369
1402370
AAGAACAAACAGAAGAAATATGTATAGAAGCAGT
TAGAAACAGCGAATTTGGATTGGCAAGAGTGA
1402435
1402436
AAAATCAAACAGAAAAAATATGTATGGAAGCAGT
TAAGCATTGTAGCTATAATCTAAAATGGGTAG
1402501
1402502
AAAATCAAACAGAAGAAATATGTATGGAAGCAGT
GAGACAAAATGGGCTTGATTTGAAATTTGTAA
1402567
1402568
AAAATCAAACAGAAACAATCTGTTTAAGAGCAGT
1402601
Left flanking sequence : Till position 1402040 (length
bp)
AGTAAATTTATTGAATTTTATAAAATTTATAAGGGGTGAGTCTAAGATATGCATGAAGATAAAAATGATA
TATTTGAATCAATAGATACTGAGGATTTTG
Right flanking sequence : From position 1402601 (length
bp)
GAGACAAAATGGAATGGCATTAGAATTTGTAAAGGAACAGACTGTTGGTATATGCTTAAAGGCAGTAAGA
CAATATGGAATGGCATTAAAATTTGTAAAA
Print the CRISPR sequence : From position
bp To position
bp