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CRISPRs details
NZ_CP010888_5
Flanking alignement tool
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NZ_CP010888_5                                                                                                                 
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Strain :
Clostridioides difficile GCF_001577795
RefSeq :
NZ_CP010888 (chromosome circular)
CRISPR id :
NZ_CP010888_5
DR consensus (30 bp) :
GTTTTAGATTAACTATATGGAATGTAAATT
Number of repetitions :
6
Begin Position :
1661474
End Position :
1661831
1661474
GTTTTAGATTAACTATATGGAATGTAAATT
AAATATAGCTTCTTCTCCATAACTATAAGTTGCAT
1661538
1661539
GTTTTAGATTAACTATATGGAATGTAAATC
CAAACGAATTTGTATTACTAAAATCATTCCACAACT
1661604
1661605
GTTTTAGATTAACTATATGGAATGTAAATT
AGCTTGATAGTATCCACCCTCCATGGCATTGTTTGA
1661670
1661671
GTTTTAGATTAACTATATGGAATGTAAATT
CAGAAACAGGAACATCAAAAGGAGGTTTAAAATCTG
1661736
1661737
GTTTTAGATTAACTATATGGAATGTAAATT
GCTGTGATTTCACTAATAAAACAATTAATAATTGT
1661801
1661802
GTTATAGATTAACTATGTGGAGAAAAACTA
1661831
Left flanking sequence : Till position 1661474 (length
bp)
GGTGTGTGATAAATGTTATCAATTGCACTACTCATGGTTCACTGCAAATTTGAGAGAGATGCGTATGTGT
AGGTATTGGAAATGCTAAGTTTATTTTGGG
Right flanking sequence : From position 1661831 (length
bp)
AATAAACAAAGAAAGCACTTACAAATATGTAGGTGCTTTTGTTTTGCTCAAATTGGTCGGTTGAGTGAAA
TAATTAGAAAAAATTAGTAAAAACTAGTAA
Print the CRISPR sequence : From position
bp To position
bp