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CRISPRs details
NZ_CP010905_4
Flanking alignement tool
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NZ_CP010905_4                                                                                                                 
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Strain :
Clostridioides difficile 630 GCF_000932055
RefSeq :
NZ_CP010905 (chromosome circular)
CRISPR id :
NZ_CP010905_4
DR consensus (29 bp) :
GTTTTAGATTAACTATATGGAATGTAAAT
Number of repetitions :
4
Begin Position :
1110236
End Position :
1110462
1110236
GAGTTATATTAACTAAGTGGTATGTAAAG
GTTTGAGAACGCTGTATAAAGCTTGTAGCTAGTTCTT
1110301
1110302
GTTTTATATTAACTAAGTGGTATGTAAAG
GTTGCATCATTAAATATTTTCCCTACAAACTCTTTTC
1110367
1110368
ATTTTATATTAACTATGTGGTATGTAAAT
AGTACATACAAAGAGTCTATAAAATTATCTATAAAGG
1110433
1110434
GTTTTATATTAACTATGTGGACTTAAAAT
1110462
Left flanking sequence : Till position 1110236 (length
bp)
GAAAAAAGAAAAGAAAGAGAATAAATAATATAGATAAAGCACTTGGATATTGTATAGTTTCAAGTGCTTT
GTCTGTTAAAAAATGGTATAATAGAGATAA
Right flanking sequence : From position 1110462 (length
bp)
TAAAAATAATTCAAAAACACTTACAAATGAGTAAGTGTTTTTTTAATGAAAGGAGGTGATAATAATGTAA
AAATTTTACTAATATAGTATAATATTGTTA
Print the CRISPR sequence : From position
bp To position
bp