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CRISPRs details
NZ_CP011098_1
Flanking alignement tool
Page manual
  
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NZ_CP011098_1                                                                                                                 
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Strain :
Mannheimia haemolytica GCF_000963635
RefSeq :
NZ_CP011098 (chromosome circular)
CRISPR id :
NZ_CP011098_1
DR consensus (32 bp) :
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
Number of repetitions :
18
Begin Position :
1041678
End Position :
1042847
1041678
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
CCTATAACGAGCAATGGCATTTTGATCTACGGTAAA
1041745
1041746
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
TTCTTGAATACCTCCGGAGTCAGTTAAGATAAGG
1041811
1041812
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
CTTTTTCAAGAATCAAGATTAAGAGATCCAAACAA
1041878
1041879
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
TCCGACACTTGCCCGTCTGCACTCGCCCTAGTGC
1041944
1041945
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
CACCGCTGCTACTTCGGTTATCGGAGTAGTTTGCAC
1042012
1042013
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
GTGGCACAGTAACACGAGCAGATGCTGATAAACGC
1042079
1042080
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
CAGCAGCCGTTGTTACCGTGGTGCAATGCTTGCG
1042145
1042146
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
TACACTTATTGCCATAGGGTAGTAGTAATCTTTTAC
1042213
1042214
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
TGCGATTTTTGGATTTTTCGGGCGATAAATGATA
1042279
1042280
CCAGCCACCTACGCGTGGCTGTGAATTGAAAC
TCGTGGCTGGTTATACAAAGAAAAGCATTGTTGG
1042345
1042346
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
TTAAATCTAAAGCTAAAGCTATTTTATTAATTAAA
1042412
1042413
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
TTTACCGTTTACCGATTGGATTTTAATGCTAGAG
1042478
1042479
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
CCTAAATTGCCGTAAAAATCTGCCATTAGCTACGC
1042545
1042546
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
CTCATAACGAATCCAATCCTGTTCGGTTAATCCCC
1042612
1042613
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
AGGGGCGTGTACCGCAATCAATTTTAATTATAACCAA
1042681
1042682
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
TTTATCTGTTGCGGTCAATTGTATATCTTGAATTT
1042748
1042749
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
CTCGTCTTGAATTGGAAAATCAAGGGCGACAATAG
1042815
1042816
GCAGCCACCTTCGCGTGGCTGTGTATTGAAAC
1042847
Left flanking sequence : Till position 1041678 (length
bp)
CAATATATTGGCGATATGCTATACTTTATCCACTCTCTACAAAACGTTAGCGAATAAAGGGCTAAAAAGC
CTGATATTTCAATACGTTATCTTATAGGGA
Right flanking sequence : From position 1042847 (length
bp)
GGTGTACCCACAAATCCTATGTTTTCGCCATTGGCTGCTACCTTCGCATCAATATATATTGAAATATCAA
TGGCAAATTTGTATGTTGTTAATTAGACTG
Print the CRISPR sequence : From position
bp To position
bp