Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011114_3                                                                                                                 top


Strain : Paenibacillus durus ATCC 35681 GCF_000993825 RefSeq :NZ_CP011114 (chromosome circular)
CRISPR id : NZ_CP011114_3
DR consensus (32 bp) : GTCGCTCTCCATGCGAGAGCGTGGATTGAAATNumber of repetitions :19
Begin Position : 602580 End Position : 603821

602580GTCGCTCCCCATGTGGGAGCGTGGATTGAAATTATCGAAAGTATCAAATGTGCCGGTCTCTTCGCCCTC602648
602649GTCGCTCCCCATGTGGGAGCGTGGATTGAAATACTTGTTCGTCCTCCTTTTTTTGAAGCGCAGAATACA602717
602718GTCGCTCCCCATGTGGGAGCGTGGATTGAAATGTTTGATTCGTCATCACTTATCCCTCCCGCGTATG602784
602785GTCGCTCCCCATGTGGGAGCGTGGATTGAAATCAGCAACAGCGCTGATGTTTCCTGGTGTGAGATAC602851
602852GTCGCTCCCCATGTGGGAGCGTGGATTGAAATTTACGCTTAAACGGCCACATCCGTAATCACCTCCGC602919
602920GTCGCTCCCCATGTGGGAGCGTGGATTGAAATAGGCGGCCATTAAGATGACGAATGACCAGCTTG602984
602985GTCGCTCCCCATGTGGGAGCGTGGATTGAAATCATACCGCCTTGCCGCTTGCGTAGAACGTGTGTAC603051
603052GTCGCTCCCCATGTGGGAGCGTGGATTGAAATCATTCTGCAAATCTATCCCACCTTAATAGGCACGG603118
603119GTCGCTCCCCATGTGGGAGCGTGGATTGAAATAGACCATTGCTAACGTGGACAGCCAGAGACGTATTCGA603188
603189GTCGCTCCCCATGTGGGAGCGTGGATTGAAATAATGCTTTGAAGACACTGTCCAAAATCTTTTGTT603254
603255GTCGCTCCCCATGTGGGAGCGTGGATTGAAATCTCAGACCAGTCTGCAAATTTTACGATGTTTTTCC603321
603322GTCGCTCCCCATGTGGGAGCGTGGATTGAAATCGAACTCAAAGACGTTGCTGGAAAGGTTGTTAAT603387
603388GTCGCTCCCCATGTGGGAGCGTGGATTGAAATTTCGGTGCGGCGGATGTTACGGGCCAACATGAGGCC603455
603456GTCGCTCCCCATGTGGGAGCGTGGATTGAAATCGAATCAACAAAGGCAATCGATACAAATGGGGATTG603523
603524GTCGCTCCCCATGCGGGAGCGTGGATTGAAATTTCTATATAAATTAACATGTCCGTATCATATTA603588
603589GTCGCTCCCCATGCGGGAGCGTGGATTGAAATCATAAATTCACATTAAAGTAAGTGATTTTTGTC603653
603654GTCGCTCCCCATGCGGGAGCGTGGATTGAAATCATTCATGGTACAGGGCTTCTTGCAGCGTTTCGTA603720
603721GTCGCACCCCGTGCGGGTGCGTGGATTGAAATAGCAATCCGACACTGGGCTAATCACTAAAACTTAGG603788
603789GTCGCACCCCGTGCGGGAGCGTGGATTGAAAT603820
Left flanking sequence : Till position 602580 (length bp)
TTATTTTATAGAAGGAGCCTCTTTTTAAACGGTCATTTTTAAGAGATTCGCACTAAAGCGTTTGCAATCC
CTTGCGTAGCAAGCGGTCGCAGCGGGTGCT
Right flanking sequence : From position 603821 (length bp)
TTAATGACACACCTTTGATTGCCCTCAATTCCGTCAAGTCGCTCTTGCTGCCCTGGGGGTAATTGCTAGT
GCGAACCCCAAGCTCCCATAAAAATCCCGG
Print the CRISPR sequence : From position bp To position bp